DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10171 and Tmem19

DIOPT Version :9

Sequence 1:NP_729888.1 Gene:CG10171 / 39501 FlyBaseID:FBgn0036353 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_006241409.1 Gene:Tmem19 / 299800 RGDID:735209 Length:350 Species:Rattus norvegicus


Alignment Length:327 Identity:147/327 - (44%)
Similarity:221/327 - (67%) Gaps:12/327 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLFCGLSVPISLFMWLGNVALSKFWSSDFEGYPTESRVIPPVRWLFSTLAPLALMTVALRRRSVN 71
            ::...|.:.|||..|:.::..|.::.|        .|.:.|.|||||.:..:.:.....:::|::
  Rat    33 IVILSLIICISLAFWIMSMTASTYYGS--------LRPVSPWRWLFSVVVSVVISCNGFKKKSLD 89

  Fly    72 RSGAALGILVAFILSIASHPFFASLVVFFFSSSRATKFRAHMKRRFESDFREGEGQRNWIQVLCN 136
            .|||..|::|.|||:||:..||.||::||.:||:.||:|..||:|.:|:::|| |||||:||.||
  Rat    90 HSGALGGLVVGFILTIANFSFFTSLLMFFLTSSKLTKWRGEMKKRLDSEYKEG-GQRNWVQVFCN 153

  Fly   137 GGMAAQLALLYLLDCGSGERAVDFAREYRSSWLGVAVMSAFACCNGDTWSSELGSVLSQRDPVSI 201
            ||:..:|||||:::.|.||..:|||:::.:||:.:::::|.|...||||:||:..|||:..|..|
  Rat   154 GGVPTELALLYMIENGPGEMPIDFAKQHTASWMCLSLLAALASSAGDTWASEVAPVLSKSSPRLI 218

  Fly   202 ITWRRVPRGTNGGVSLLGVAVSLLGGLLVGFGYFVTVRYTVEAKMLLISPPQWPIIAFGGIAGLF 266
            .||.:||.||||||:.:|:..|||||..||..||:|  ..|....|.||.||||:|||||:|||.
  Rat   219 TTWEKVPVGTNGGVTAVGLVSSLLGGTFVGLAYFLT--QLVFVNDLDISAPQWPLIAFGGLAGLL 281

  Fly   267 GSLLDSVLGGLLQFSGINEE-GKIVDTPGKGVRHVSGLRILDNHSVNLISSIVTGVTIPLLAQRF 330
            ||::||.||..:||||::|. |.:|.:|.:..:|:||..||||::|||.||::..:.:|..|..|
  Rat   282 GSIVDSFLGATMQFSGLDESTGLVVSSPTQETKHISGKPILDNNAVNLFSSVLVALLLPTAASGF 346

  Fly   331 WP 332
            ||
  Rat   347 WP 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10171NP_729888.1 DUF92 59..318 CDD:280173 128/259 (49%)
Tmem19XP_006241409.1 DUF92 82..334 CDD:280173 128/254 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353320
Domainoid 1 1.000 265 1.000 Domainoid score I1829
eggNOG 1 0.900 - - E1_COG1836
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10107
Inparanoid 1 1.050 299 1.000 Inparanoid score I2624
OMA 1 1.010 - - QHG55191
OrthoDB 1 1.010 - - D1476886at2759
OrthoFinder 1 1.000 - - FOG0005785
OrthoInspector 1 1.000 - - otm45599
orthoMCL 1 0.900 - - OOG6_102547
Panther 1 1.100 - - LDO PTHR13353
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4174
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.