DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17687 and cfap43

DIOPT Version :10

Sequence 1:NP_001368937.1 Gene:CG17687 / 39495 FlyBaseID:FBgn0036348 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_697139.4 Gene:cfap43 / 568701 ZFINID:ZDB-GENE-080815-3 Length:1642 Species:Danio rerio


Alignment Length:1850 Identity:366/1850 - (19%)
Similarity:679/1850 - (36%) Gaps:496/1850 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VCWCNIWDKDTLVNVGPDVLCQRNGNAMKFVHMQTKAVTFFKAETV-STGLSISCFAGHNRFPLF 70
            |.|...:...|...|....:|...||.:.|::::||     :.:|: |.|..|..|....:....
Zfish    13 VQWVQGFTNGTFRFVDKKTVCYTCGNFIVFLNVETK-----ERKTLQSPGSGIGAFTASGQRRCI 72

  Fly    71 AFAEVVLRPNIYIYRYPDMAKFSSIPPHMMSYTDIRFSELDL------LIAVGGYPDYCLCVFNY 129
            ||:::.|:|:|:||:||::    .:...:...|.:.::.|.|      |::....||:.:.::|:
Zfish    73 AFSDLGLKPSIFIYKYPEL----ELTSELKGTTKLGYTALALCDTGPYLVSASPMPDHIITLWNW 133

  Fly   130 RTGTLVLEQFTNVPTVERGIVISFTSLPSIIQLNKQDMTIICY------EICTVEKESF------ 182
            .:|         :|.....::             .:|::.:.:      :||.::.:|.      
Zfish   134 ESG---------LPLCSHSLL-------------DEDISALVFNPMNWCQICAIKSKSLTIWNVE 176

  Fly   183 ------LYKVAEVEL-------------------GK---------------------------KF 195
                  |.|.:.|.|                   ||                           |.
Zfish   177 RCDNYHLMKPSAVNLPGTDGSAIECEPNQSHLLNGKLTYLGPQMPTSAIAGLIGDQADNFVPLKL 241

  Fly   196 LKS--CNRCLSFGEDNTLYATNDFGHLLSVDVACFALKPQWQPTSESDSVTEMEKMPRSHG---- 254
            :|.  |...:.:...:.||.....|.||.|:.....:...::|  :::..|...:||...|    
Zfish   242 IKPRLCPSAICWSISSDLYVGCKEGFLLCVNPETLHVSVLYKP--QTEVTTGNSEMPMQEGSFQS 304

  Fly   255 LTYHKSG-FLIWNSTTAYYVKKKAGVFKLE----WEFEGRLNEV-------VRFLSNNNGEIYAE 307
            |....|. |.....:....::.|..  |||    |..|...:.:       ...|::|.|.:|  
Zfish   305 LVLQDSKLFAAGMESVLRSIQIKGN--KLEVVQTWALEEAASAMCFSPDGETLLLTSNTGCVY-- 365

  Fly   308 RRPGHIDQVVVDRNGTVSLEAV---VPTGKPVITFRVVQGLKDECVCV-LHDEGVAMM-----DL 363
                ....::.|:...| |:.:   ..|..||.|        |..:|: :.:.||..:     .|
Zfish   366 ----RFKPLLKDKAVKV-LDVLCGDFVTVAPVYT--------DRSICLSVREAGVVQLWTLDDGL 417

  Fly   364 AKGNTLCEVSVPGATAMCNHRSLALVVVGTLDASIVLIHFERASLPHVLCDLKMETAAVVGIEFN 428
            ..|:...:..|   |:|........:||||....::.:.......|.::..:.:....|..:.|:
Zfish   418 CMGSISLQTHV---TSMACCPIAQYIVVGTATGDVLFVEMTTKQKPRLVHRVHLYHVPVDHLVFD 479

  Fly   429 DSWVVFQDQMKVLHVVQVDNRPHK-----------------LTHYFEMNPPELSQVFIHTFLLAD 476
            ..............|..:|:||.|                 .|.|.:    |..|:         
Zfish   480 QGGNCLITGASDSRVFVLDSRPSKGFDIIGWIEAPGAIVGLSTQYHQ----ESKQI--------- 531

  Fly   477 GPRLMVFINRDHSMKRPG--------FATELWLYNWGKDKRLH---RREYI------LP------ 518
              :::|..|:.......|        ||.:|.......|  .|   |:|..      ||      
Zfish   532 --KVLVLCNKSEKEISEGNVLLLLTLFAQQLTESTSCMD--AHGCLRKEVFDSCVLELPNSLCSC 592

  Fly   519 -----KQYGFFCVQPPVGRWALIEIVATEYNTLNFDQFALNEKDE-----LQWIASTKSGHFSYI 573
                 |.:| :|.|..|                 ..:|::.|..|     :|.|...::|  .::
Zfish   593 VLAVNKIFG-YCQQRKV-----------------LQRFSIPENGENPNNVVQLIPEKETG--GHL 637

  Fly   574 LGAG---MTKHLVTW--SLG--GILVHFKQHKRAKKPFMICRFLNLGMQTEYI-LRVKECF---- 626
            |...   ::.| .||  |:|  |:|                |...:.....|: |:...|:    
Zfish   638 LSPAFLQLSPH-HTWLASVGRDGLL----------------RICEISEMDRYVQLQCHSCWQGGV 685

  Fly   627 -------NSKYLIIL-LANKSMRVMRLPSLADFVRENVALPLPTEEGIPCFVEQIIHKVDMFVPL 683
                   :|:.:|.. |.:.|:...|| .|:...:.|.|                         .
Zfish   686 GSVCFTPDSQTIITSGLRDGSLVCSRL-KLSGVGKANAA-------------------------T 724

  Fly   684 SQRQEVKEEYTRADLAKREKLFTIIKDFAAKVTALIDYDISKTGKTQGIFKKFCFH--------- 739
            ...|.|.:.:.           :::......:|.:.|.|...||:..  .|....|         
Zfish   725 QYSQSVADSFE-----------SVVSSENTVLTKMTDRDSFHTGEVS--LKGKMSHEAEQEENYF 776

  Fly   740 -----YRWLD-----ALTEEAHKLCALERESLERAIADQSRIRDWILRLVTRDAVSINYRVRSIF 794
                 |.|||     .|.|||.:. |..:::|.|.|.            |.||.:..........
Zfish   777 TSPTSYTWLDGKLDAVLQEEAQQY-AETKKNLRRNIK------------VLRDTIKAMMEENESL 828

  Fly   795 ADANFESFSVRRKVEMSEFDKYRFYDLEDHLRLSLGSFEE------------------------E 835
            ||.        .|:|..||:    .|:|:..||.|...:|                        |
Zfish   829 ADI--------EKLEQQEFN----LDVEEQQRLQLEGDQEVNRVRKEIEMENLAKSYQREVLKRE 881

  Fly   836 EPPAPAAGGHGPPAAIEDGEV----------DEEETVEVVQGLRELKPFVVEGPSVYEHIMAPVF 890
            ...:....|....|...:.||          .|.|.:.:|:.:|:::.   |...:.|.::..:|
Zfish   882 CWDSMQVKGKAIKAFHSENEVKNYPMKERTAKELEELRMVENMRQIEQ---EDSQLQEGVLDTLF 943

  Fly   891 --QLQDKNLVTSNQLFNYNCKIRFYLNDPLKQEFNKLFHEAQQLKQDTI--DSVMNTNVVLNKIY 951
              :.::.:|..|..|......:...:|..|..:|| |....|::.|.|:  |.:.|.....||.:
Zfish   944 GDKEEEVSLTESPALTGSLSSLYGGVNPYLYNQFN-LHVREQKINQITLLKDVIYNVKSAFNKEF 1007

  Fly   952 DNM-------------------NIMLRLLNMDQFKPPELTVPSLAKDEVIKQIMEVDDSEVKAIN 997
            :.:                   .||.:|...:....|.||     .:|..::.:.|.|||:|.  
Zfish  1008 EAVYKQKEQEIHRTKEKNKRIFQIMAKLGISETLWEPRLT-----DNECPERALTVTDSEIKV-- 1065

  Fly   998 RRKPKTIDTGGKKG---------RLLLWSKEFWARALIVMMDGVLEKLWEEEIKKDIPEPEFMQK 1053
             .|..|::...|:.         ||...|:....:.|.|||.||||...|:.::.::|:||||.|
Zfish  1066 -EKYLTLEQKEKEAKLREEEERQRLAAKSENMRDQGLSVMMGGVLELKKEDVLRMEVPQPEFMSK 1129

  Fly  1054 KQPHEFNLEEQKIFRAYEEAVHLLELDRRKYLRILHENEEKTLALKASQILKL-NQRVAELMILK 1117
            .:. ::..||:|.|:.:|:....|..::.||.:.| |.|.|.|.....:..:: ::::|:|...|
Zfish  1130 PEA-QWTEEERKSFKEFEKKAKELSEEQEKYRKTL-ETEMKKLLTSIKEATQMFDEKLAKLFERK 1192

  Fly  1118 LKYDFALKQGQLRMLTL-------EKINFGRVQMRKRYNMFRKDIDKLNDYMTRYSNLLDFYDKA 1175
            :|.:..:.|.:|::..|       |:|.....|:..:....|...:::.:.:.::...:|.:.:|
Zfish  1193 VKSEMVIYQEELKIANLVLSIQTEEEILTREKQLSFKLEKARIKKNEIGEELKKHKETVDEFREA 1257

  Fly  1176 FLDVKTRLEAQQTRDRAVERQFRSQFLPLVPHATHEMTKLFKKRPKLPGKVFNSVLICMEASNKL 1240
            :       :.....|:.:::.||.:|..:..|:..::.||:|:||::                :.
Zfish  1258 Y-------DNTVAEDKLLDKGFRKEFYDVPGHSIDQLYKLYKRRPRV----------------QR 1299

  Fly  1241 SGKPSHRTPF---PLPDDVLE-FLNYLAEFDQPKQCPPNVDPKSWDAFVKLRRQKTESELRLKGI 1301
            ....:...||   ..|.|.|. .:..:.|.|.|:.....:||..|:.|...||.|.|||.::|..
Zfish  1300 MKTQTENNPFKEGAAPSDGLSLMMKAMEELDAPEHMLEGLDPAVWERFCLARRAKVESEQKVKLK 1364

  Fly  1302 GYQLLDSQALL--GVLNKDLAALKESKILTQRNS--EDSIQTYLEKMRNMTIQLTLTMGQVEVSV 1362
            ...|.:.||.|  .:...|.|.|:...::.:.|.  ::.::..|:.|    :|:.|..|||||..
Zfish  1365 ALTLAEMQAFLQRRIDEDDEAQLEIKNLIDELNGLCDEKMRFRLDSM----VQIVLQQGQVEVEA 1425

  Fly  1363 MGQF-TKLSNTVLMHVDDINDVNRQIQEAGNKKIKAMQRVAVFRRQVIFKEWEHKLYKANIAYLK 1426
             |:| ...||.:|:....:.|:|..|:..|::||..|.....||:.:|.:||||:..:..:..|.
Zfish  1426 -GEFIADYSNALLIQRKVVEDLNSTIRALGDQKIATMVECKDFRKGIIQQEWEHRRMRMQLEDLS 1489

  Fly  1427 YMLDAIEKCKVS---MEFLNILRNWEKVKTERQKYIAGAIERVIEQKIAVFRKNIDRVNIKIDAV 1488
            .....|:..:::   .::||...|..:|..:     ...:||.::.:....:|.|:....:...:
Zfish  1490 NKARNIQTLRITQDIQDYLNETNNDNRVSKQ-----LTTLERTLDLQKTAHQKKIEICKKQKRQL 1549

  Fly  1489 KAQTLEIKRSNHAIDFKIERIKVDVT-FQNTLRDTMMEDKRDREQRERMSQIKTHRQLMENVRRN 1552
            ..|..:::..|.|:|.::..:::.|. .:|......|||.::.|..:....|...::|:...|..
Zfish  1550 DRQVAKMQEKNAALDLRVAEMEITVAERRNFYEAAAMEDNQETESDKNYQDILLRKKLLAIARAQ 1614

  Fly  1553 YAHVLELQTILELLRLRTYPTLGPPLPQCH 1582
            ...:|.|:..||.||::.:|:|.    |.|
Zfish  1615 SEELLLLRAELEKLRMKNFPSLS----QLH 1640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17687NP_001368937.1 None
cfap43XP_697139.4 WD40 93..443 CDD:475233 63/393 (16%)
WD40 repeat 343..389 CDD:293791 7/52 (13%)
WD40 <344..498 CDD:441893 28/171 (16%)
WD40 repeat 428..465 CDD:293791 8/39 (21%)
WD40 repeat 473..512 CDD:293791 7/38 (18%)
WD40 635..>707 CDD:475233 15/88 (17%)
WD40 repeat 642..680 CDD:293791 10/54 (19%)
CCDC158 793..>1571 CDD:464943 188/849 (22%)

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