DRSC/TRiP Functional Genomics Resources

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Protein Alignment slc25a40 and Tyler

DIOPT Version :9

Sequence 1:NP_989316.1 Gene:slc25a40 / 394941 XenbaseID:XB-GENE-1003942 Length:341 Species:Xenopus tropicalis
Sequence 2:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster


Alignment Length:402 Identity:141/402 - (35%)
Similarity:209/402 - (51%) Gaps:89/402 - (22%)


- Green bases have known domain annotations that are detailed below.


 Frog    14 ITPSQQMIASSMGALLTSFFVTPLDVVKIRLQAQ----SKPFIKGKCFVYCNGLMDHLC----LC 70
            |.|.||::::.:|.|:|:|.||||:|||.|:|.|    .:|.:...|:||.||||.|:|    :|
  Fly    43 IKPMQQVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCRSSDIC 107

 Frog    71 TNGNGKAWYRAPGH---FRGTTDAFVQIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLRDI 132
            ....|    |.|.:   .||..||||:|:...|...||:||.||||.|:|:|:|||..|:.:::.
  Fly   108 VPKPG----RDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEYIKNS 168

 Frog   133 L--------------------------------------------IRSMPERAEIASLVAGATAR 153
            |                                            ..|:|....:||   |..:|
  Fly   169 LSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMAS---GICSR 230

 Frog   154 LWSATLISPLELIRTKMQYRPLSYKELRQCIQSSVAKDGWLALWKGWGPTVLRDVPFSALYWHNY 218
            ....|.|:|:|::|.|||...::|.||.:.::|.:.:.|.|.||:||.|||:||.|||..||..|
  Fly   231 TIVVTAITPIEMVRIKMQSEYMTYAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVY 295

 Frog   219 ELVKQSLCQRYNTLQPTFAISFTAGAVSGSIAAIVTLPFDVVKTRRQVEVGELEMF--------- 274
            |.:|::    ::..:|||..||..||:||::|..||:|||::.|..|:|:|:..::         
  Fly   296 EAIKRA----FSVTEPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTGA 356

 Frog   275 ---TYSQKRSS-----------STWKLMRAIVIENGFGGLFAGLIPRLIKVAPACAIMISTYEFG 325
               |.:..|..           |....||.|....|..||:.|::||:::|.|||||||||:|:.
  Fly   357 GTGTGAGARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEYS 421

 Frog   326 KSFFRKLNNERQ 337
            ||||...|.:.|
  Fly   422 KSFFFHYNLDLQ 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slc25a40NP_989316.1 Mito_carr 14..135 CDD:365909 56/175 (32%)
Solcar 1 14..132 55/128 (43%)
Solcar 2 140..224 35/83 (42%)
Mito_carr 143..225 CDD:365909 35/81 (43%)
Mito_carr 234..331 CDD:365909 46/119 (39%)
Solcar 3 234..328 43/116 (37%)
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 56/131 (43%)
Mito_carr 216..302 CDD:278578 37/92 (40%)
Mito_carr 306..429 CDD:278578 46/122 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 87 1.000 Domainoid score I7858
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 295 1.000 Inparanoid score I2686
OMA 1 1.010 - - QHG53824
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm9516
Panther 1 1.100 - - O PTHR45760
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1001
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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