DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment caps and RLP35

DIOPT Version :9

Sequence 1:	NP_001303391.1	Gene:	caps / 39493	FlyBaseID:	FBgn0023095	Length:	811	Species:	Drosophila melanogaster
Sequence 2:	NP_001319521.1	Gene:	RLP35 / 820279	AraportID:	AT3G11080	Length:	943	Species:	Arabidopsis thaliana

Alignment Length:	527	Identity:	128/527 - (24%)
Similarity:	199/527 - (37%)	Gaps:	159/527 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    41 ANCPN--GCECDDDTLMVNCGEGTLDVLPIAL-----------NPAIQRL-------VIKNNKLK 85
            ::|.|  |..||     ...||    |:.:.|           |.::.||       :.:|:...
plant    84 SDCCNWEGITCD-----TKSGE----VIELDLSCSWLYGSFHSNSSLFRLQNLRVLDLTQNDLDG 139

  Fly    86 TIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNK-------------------- 130
            .|.||:...:.||.|.||:|..|.:...|....::|..|||..|:
plant   140 EIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLEL 204

  Fly   131 ------------IGQVSNKTFLGLST--------ISVLNLR---------GNLIAELEYRTFSPM 166
                        ||.:||.|||.|.:        .|:.||.         .|.:.|:. .:|..:
plant   205 SSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGEIP-SSFGNL 268

  Fly   167 VKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLT-TVPGELTFQALHSLAELYLGTNSFM- 229
            .:|..|.:..|::|...|.:|..|..|..|.|..|..| |:|..::.  |.:|.:.....|:|.
plant   269 NQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISL--LSNLMDFEASNNAFTG 331

  Fly   230 TIPGGAFQDLKGLTRLDLR----GAGLH--NISGDALKGLVSLRFLDL-SDNRLPAIPTAAFQRL 287
            |:|...| ::..|.||||.    ...||  |||..:     :|::|.: |:|.:..||    :.|
plant   332 TLPSSLF-NIPPLIRLDLSDNQLNGTLHFGNISSPS-----NLQYLIIGSNNFIGTIP----RSL 386

  Fly   288 GRLEQLNIGQNDFEV---------ISSGAFSGLRELRHLELTGA--------------QRLRRVE 329
            .|...|.:    |::         :....||.|:.|..|.|:..              :.||.::
plant   387 SRFVNLTL----FDLSHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTIDLNDILPYFKTLRSLD 447

  Fly   330 -SGAFSGNTNLEHLNLSSNKQLNELSSIALG--GLPHLSTVVLKANQLSSLD------EGLVP-- 383
             ||.....||..  ::||:.....:.|:.|.  |:.....::...::|..||      :|.||
plant   448 ISGNLVSATNKS--SVSSDPPSQSIQSLYLSGCGITDFPEILRTQHELGFLDVSNNKIKGQVPGW 510

  Fly   384 -WA--DLQTLDLSEN---PFECDCRLLWLR--------HLLVS-RNASGQYAPVICAYPTALRDL 433
             |.  :|..|:||.|   .||...:...|.        ||..| .|.:|:....||    .||.|
plant   511 LWTLPNLFYLNLSNNTFISFESSSKKHGLSSVRKPSMIHLFASNNNFTGKIPSFIC----GLRSL 571

  Fly   434 PLAHLAE 440
            ....|:|
plant   572 NTLDLSE 578

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	6/27 (22%)
		LRR_8	96..155	CDD:290566	25/107 (23%)
		leucine-rich repeat	97..120	CDD:275380	8/22 (36%)
		leucine-rich repeat	121..144	CDD:275380	13/54 (24%)
		LRR_8	143..201	CDD:290566	16/74 (22%)
		leucine-rich repeat	145..168	CDD:275380	6/31 (19%)
		LRR_RI	147..397	CDD:238064	75/307 (24%)
		leucine-rich repeat	169..192	CDD:275380	7/22 (32%)
		leucine-rich repeat	193..217	CDD:275380	8/24 (33%)
		LRR_8	217..276	CDD:290566	20/66 (30%)
		leucine-rich repeat	218..241	CDD:275380	6/23 (26%)
		leucine-rich repeat	242..265	CDD:275380	10/28 (36%)
		LRR_8	265..321	CDD:290566	16/65 (25%)
		leucine-rich repeat	266..289	CDD:275380	7/23 (30%)
		leucine-rich repeat	290..313	CDD:275380	5/31 (16%)
		LRR_8	312..374	CDD:290566	14/78 (18%)
		leucine-rich repeat	314..335	CDD:275380	7/35 (20%)
		leucine-rich repeat	339..363	CDD:275380	5/25 (20%)
		LRRCT	395..445	CDD:214507	16/58 (28%)
RLP35	NP_001319521.1	LRRNT_2	39..95	CDD:311940	3/10 (30%)
		PLN00113	79..>658	CDD:331614	128/527 (24%)
		leucine-rich repeat	103..123	CDD:275380	2/19 (11%)
		leucine-rich repeat	127..150	CDD:275380	4/22 (18%)
		leucine-rich repeat	151..174	CDD:275380	8/22 (36%)
		leucine-rich repeat	175..198	CDD:275380	5/22 (23%)
		leucine-rich repeat	199..222	CDD:275380	2/22 (9%)
		leucine-rich repeat	223..246	CDD:275380	7/22 (32%)
		leucine-rich repeat	247..270	CDD:275380	3/23 (13%)
		leucine-rich repeat	271..294	CDD:275380	7/22 (32%)
		leucine-rich repeat	295..318	CDD:275380	8/24 (33%)
		leucine-rich repeat	319..337	CDD:275380	5/17 (29%)
		leucine-rich repeat	343..367	CDD:275380	10/28 (36%)
		leucine-rich repeat	368..388	CDD:275380	7/23 (30%)
		leucine-rich repeat	392..417	CDD:275380	5/28 (18%)
		leucine-rich repeat	443..469	CDD:275380	8/27 (30%)
		leucine-rich repeat	470..492	CDD:275380	3/21 (14%)
		leucine-rich repeat	493..516	CDD:275380	7/22 (32%)
		leucine-rich repeat	517..541	CDD:275380	8/23 (35%)
		leucine-rich repeat	542..570	CDD:275380	8/31 (26%)
		leucine-rich repeat	571..594	CDD:275380	3/8 (38%)
		leucine-rich repeat	596..617	CDD:275380
		leucine-rich repeat	618..641	CDD:275380
		LRR_8	640..698	CDD:316378
		leucine-rich repeat	642..665	CDD:275380
		leucine-rich repeat	716..803	CDD:275380
		PLN00113	<758..864	CDD:331614
		leucine-rich repeat	804..825	CDD:275380
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000