Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_078785.1 | Gene: | LRFN3 / 79414 | HGNCID: | 28370 | Length: | 628 | Species: | Homo sapiens |
Alignment Length: | 622 | Identity: | 143/622 - (22%) |
---|---|---|---|
Similarity: | 197/622 - (31%) | Gaps: | 223/622 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 MSLAPHLGQAFSLCLCLCLCLVLATLPVALGLANCPNGCECDDDT--LMVNC-GEGTLDVLPIAL 70
Fly 71 NPAIQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVS 135
Fly 136 NKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDD 200
Fly 201 NTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVS 265
Fly 266 LRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVES 330
Fly 331 GAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSEN 395
Fly 396 PFECDCRLLWLRHLLVSRNASGQYAPVICAYPTALR--------------DLPLAHLAEPLLGCA 446
Fly 447 HGAASKQAIIGILVVACAALITTLALVLYTCR------HRIREMLKGHSALGRKEREYQKTFSD- 504
Fly 505 --EEYMSRPPPGGGGVHPAAGGYPYIAGNS--RMIPVTELXLEAPPPPQLRGRGGGGGASTA--- 562
Fly 563 --SGAVQQLQVPSAVDQASNSFAQLSHIHYMTNNGQQ 597 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 0/20 (0%) |
LRR_8 | 96..155 | CDD:290566 | 5/58 (9%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 143..201 | CDD:290566 | 20/57 (35%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 147..397 | CDD:238064 | 67/249 (27%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 11/23 (48%) | ||
LRR_8 | 217..276 | CDD:290566 | 13/58 (22%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 265..321 | CDD:290566 | 21/55 (38%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 312..374 | CDD:290566 | 10/61 (16%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 3/20 (15%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 3/23 (13%) | ||
LRRCT | 395..445 | CDD:214507 | 17/63 (27%) | ||
LRFN3 | NP_078785.1 | LRR_8 | 59..119 | CDD:290566 | 21/74 (28%) |
LRR 1 | 60..83 | 6/37 (16%) | |||
LRR_RI | <63..168 | CDD:238064 | 39/128 (30%) | ||
leucine-rich repeat | 63..84 | CDD:275380 | 7/20 (35%) | ||
LRR 2 | 84..105 | 7/20 (35%) | |||
leucine-rich repeat | 85..108 | CDD:275380 | 8/22 (36%) | ||
LRR 3 | 108..129 | 10/21 (48%) | |||
leucine-rich repeat | 109..132 | CDD:275380 | 11/23 (48%) | ||
LRR 4 | 132..153 | 6/20 (30%) | |||
leucine-rich repeat | 133..157 | CDD:275380 | 7/46 (15%) | ||
LRR_8 | 157..216 | CDD:290566 | 23/87 (26%) | ||
LRR 5 | 157..178 | 9/20 (45%) | |||
leucine-rich repeat | 158..181 | CDD:275380 | 11/22 (50%) | ||
LRR 6 | 181..202 | 5/20 (25%) | |||
leucine-rich repeat | 182..205 | CDD:275380 | 7/22 (32%) | ||
LRR 7 | 205..226 | 7/51 (14%) | |||
leucine-rich repeat | 206..230 | CDD:275380 | 8/54 (15%) | ||
leucine-rich repeat | 242..253 | CDD:275378 | 5/17 (29%) | ||
TPKR_C2 | 249..>281 | CDD:301599 | 14/37 (38%) | ||
IG_like | 302..383 | CDD:214653 | 24/112 (21%) | ||
Ig | 310..383 | CDD:299845 | 22/104 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 382..430 | 15/58 (26%) | |||
fn3 | 424..502 | CDD:278470 | 3/9 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |