| Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_071426.1 | Gene: | LRRC4 / 64101 | HGNCID: | 15586 | Length: | 653 | Species: | Homo sapiens |
| Alignment Length: | 779 | Identity: | 178/779 - (22%) |
|---|---|---|---|
| Similarity: | 254/779 - (32%) | Gaps: | 274/779 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 LCLVLATLPVALGLANCPNGCECDDDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDSSM 91
Fly 92 QFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIA 156
Fly 157 ELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAEL 221
Fly 222 YLGTNSFMTIPGGAFQDLKGLTRLDLRGAG----LHNISGDALKGLVSLRFLDLSDNRLPAIPTA 282
Fly 283 AFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSN 347
Fly 348 KQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSENPFECDCRLLWL------ 406
Fly 407 --------------------RHLLVSRNASGQ-YAPVICAYPTALRDLPLA--HLAEPLLGCAHG 448
Fly 449 AASKQAIIGILVVACAALITTLALVLYTCRH-RIREMLKG-----HSALGRKEREYQKTFSDEEY 507
Fly 508 MSRPPPGGGGVHPAAGGYPYIAGNSR-----------------------MIPVTELXLE------ 543
Fly 544 APPPPQLRGRGGGGGASTASGAVQQLQVPSAVDQASNSFAQLSHIHYMTNNGQQQQAQQQQSTSK 608
Fly 609 MHHSQQDMRLLACNGGKPLNATSL--------PRHRPPVVQESTLS----------HYSQPLANG 655
Fly 656 IRLT-----------------QDHFNHN-QNQSHNQHY-----GGVYAKPCDAMSEPGYIHNNS 696 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 2/20 (10%) |
| LRR_8 | 96..155 | CDD:290566 | 4/58 (7%) | ||
| leucine-rich repeat | 97..120 | CDD:275380 | 0/22 (0%) | ||
| leucine-rich repeat | 121..144 | CDD:275380 | 0/22 (0%) | ||
| LRR_8 | 143..201 | CDD:290566 | 20/57 (35%) | ||
| leucine-rich repeat | 145..168 | CDD:275380 | 7/22 (32%) | ||
| LRR_RI | 147..397 | CDD:238064 | 84/253 (33%) | ||
| leucine-rich repeat | 169..192 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 193..217 | CDD:275380 | 10/23 (43%) | ||
| LRR_8 | 217..276 | CDD:290566 | 24/62 (39%) | ||
| leucine-rich repeat | 218..241 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 12/26 (46%) | ||
| LRR_8 | 265..321 | CDD:290566 | 17/55 (31%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 10/22 (45%) | ||
| LRR_8 | 312..374 | CDD:290566 | 16/61 (26%) | ||
| leucine-rich repeat | 314..335 | CDD:275380 | 6/20 (30%) | ||
| leucine-rich repeat | 339..363 | CDD:275380 | 7/23 (30%) | ||
| LRRCT | 395..445 | CDD:214507 | 23/78 (29%) | ||
| LRRC4 | NP_071426.1 | LRRNT | 46..79 | CDD:214470 | 10/49 (20%) |
| LRR | <74..291 | CDD:227223 | 81/301 (27%) | ||
| LRR 1 | 76..97 | 7/74 (9%) | |||
| leucine-rich repeat | 77..100 | CDD:275380 | 7/76 (9%) | ||
| LRR 2 | 100..121 | 8/20 (40%) | |||
| leucine-rich repeat | 101..124 | CDD:275380 | 10/22 (45%) | ||
| LRR 3 | 124..145 | 9/21 (43%) | |||
| leucine-rich repeat | 125..148 | CDD:275380 | 10/23 (43%) | ||
| LRR 4 | 148..169 | 9/20 (45%) | |||
| leucine-rich repeat | 149..172 | CDD:275380 | 9/22 (41%) | ||
| LRR 5 | 172..194 | 10/24 (42%) | |||
| leucine-rich repeat | 173..197 | CDD:275380 | 12/26 (46%) | ||
| LRR 6 | 197..218 | 4/22 (18%) | |||
| leucine-rich repeat | 198..219 | CDD:275380 | 5/22 (23%) | ||
| LRR 7 | 219..240 | 8/20 (40%) | |||
| leucine-rich repeat | 220..243 | CDD:275380 | 10/22 (45%) | ||
| LRR 8 | 243..264 | 6/21 (29%) | |||
| leucine-rich repeat | 244..267 | CDD:275380 | 7/23 (30%) | ||
| LRR 9 | 267..288 | 9/44 (20%) | |||
| leucine-rich repeat | 268..289 | CDD:275380 | 9/44 (20%) | ||
| LRRCT | 300..351 | CDD:214507 | 13/50 (26%) | ||
| IG | 359..441 | CDD:214652 | 25/120 (21%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 151 | 1.000 | Inparanoid score | I4370 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.960 | |||||