| Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_065913.1 | Gene: | LRFN1 / 57622 | HGNCID: | 29290 | Length: | 771 | Species: | Homo sapiens |
| Alignment Length: | 777 | Identity: | 168/777 - (21%) |
|---|---|---|---|
| Similarity: | 227/777 - (29%) | Gaps: | 287/777 - (36%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 32 ATLPVALGL-------ANCPNGCECDD--DTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTI 87
Fly 88 DSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRG 152
Fly 153 NLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHS 217
Fly 218 LAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTA 282
Fly 283 AFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSN 347
Fly 348 KQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSENPFECDCRLLWLRHLLVS 412
Fly 413 RNASGQYAPVICAYPTALRDLPLAHLAEPLLGCAHGAASKQAIIGILVVACAALITTLALVLYTC 477
Fly 478 RHRIREMLKGHSALGRKEREYQKTFSDEEYM---SRPPPGGGGVHPA-------AGGYPYIAGNS 532
Fly 533 R-------MIPVTELXLEAPP---PPQLRGRGGGGGASTASGAVQQLQVPSAVDQASNSFAQLSH 587
Fly 588 IHYMTNNGQQQQAQQQQSTSKMHHSQQDMRLLACNGGKPLNATSL----PRHRPPVVQESTLSHY 648
Fly 649 SQPLANGIRLTQDHFNHNQNQSHNQHYGGVYAKPCDAMSEPGYIHNNSHYSLPLD------HDLP 707
Fly 708 PSPTPTPPPPALPLRNGVGMALIHGNTTGRRSFNNNNNVSTLSNNNHHGIGGGVGVAVGGTV 769 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 2/20 (10%) |
| LRR_8 | 96..155 | CDD:290566 | 3/58 (5%) | ||
| leucine-rich repeat | 97..120 | CDD:275380 | 0/22 (0%) | ||
| leucine-rich repeat | 121..144 | CDD:275380 | 0/22 (0%) | ||
| LRR_8 | 143..201 | CDD:290566 | 20/57 (35%) | ||
| leucine-rich repeat | 145..168 | CDD:275380 | 8/22 (36%) | ||
| LRR_RI | 147..397 | CDD:238064 | 65/249 (26%) | ||
| leucine-rich repeat | 169..192 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 193..217 | CDD:275380 | 10/23 (43%) | ||
| LRR_8 | 217..276 | CDD:290566 | 15/58 (26%) | ||
| leucine-rich repeat | 218..241 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 3/22 (14%) | ||
| LRR_8 | 265..321 | CDD:290566 | 18/55 (33%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 312..374 | CDD:290566 | 7/61 (11%) | ||
| leucine-rich repeat | 314..335 | CDD:275380 | 3/20 (15%) | ||
| leucine-rich repeat | 339..363 | CDD:275380 | 4/23 (17%) | ||
| LRRCT | 395..445 | CDD:214507 | 16/49 (33%) | ||
| LRFN1 | NP_065913.1 | LRR_RI | <65..174 | CDD:238064 | 42/199 (21%) |
| LRR_8 | 65..125 | CDD:290566 | 23/126 (18%) | ||
| LRR 1 | 66..87 | 8/87 (9%) | |||
| leucine-rich repeat | 67..90 | CDD:275380 | 9/89 (10%) | ||
| LRR 2 | 90..111 | 6/20 (30%) | |||
| leucine-rich repeat | 91..114 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 113..174 | CDD:290566 | 25/84 (30%) | ||
| LRR 3 | 114..135 | 9/21 (43%) | |||
| leucine-rich repeat | 115..138 | CDD:275380 | 10/23 (43%) | ||
| LRR 4 | 138..159 | 7/41 (17%) | |||
| leucine-rich repeat | 139..163 | CDD:275380 | 10/46 (22%) | ||
| LRR_8 | 162..222 | CDD:290566 | 20/88 (23%) | ||
| LRR 5 | 163..184 | 9/20 (45%) | |||
| leucine-rich repeat | 164..187 | CDD:275380 | 9/22 (41%) | ||
| LRR_4 | 165..203 | CDD:289563 | 13/37 (35%) | ||
| LRR 6 | 187..208 | 6/20 (30%) | |||
| leucine-rich repeat | 188..211 | CDD:275380 | 7/22 (32%) | ||
| LRR 7 | 211..232 | 7/60 (12%) | |||
| leucine-rich repeat | 212..230 | CDD:275380 | 5/46 (11%) | ||
| LRRCT | 252..>284 | CDD:214507 | 14/37 (38%) | ||
| IG_like | 310..385 | CDD:214653 | 16/85 (19%) | ||
| Ig | 314..387 | CDD:299845 | 15/83 (18%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 397..422 | 7/32 (22%) | |||
| fn3 | 426..500 | CDD:278470 | 22/108 (20%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 654..743 | ||||
| PDZ-binding | 768..771 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||