Protein Alignment caps and lrrc4.2

DIOPT Version :9

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_001093494.1
• Gene: lrrc4.2 / 566572
• ZFINID: ZDB-GENE-030131-7997
• Length: 644
• Species: Danio rerio
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380
		LRR_8	96..155	CDD:290566
		leucine-rich repeat	97..120	CDD:275380
		leucine-rich repeat	121..144	CDD:275380
		LRR_8	143..201	CDD:290566
		leucine-rich repeat	145..168	CDD:275380
		LRR_RI	147..397	CDD:238064
		leucine-rich repeat	169..192	CDD:275380
		leucine-rich repeat	193..217	CDD:275380
		LRR_8	217..276	CDD:290566
		leucine-rich repeat	218..241	CDD:275380
		leucine-rich repeat	242..265	CDD:275380
		LRR_8	265..321	CDD:290566
		leucine-rich repeat	266..289	CDD:275380
		leucine-rich repeat	290..313	CDD:275380
		LRR_8	312..374	CDD:290566
		leucine-rich repeat	314..335	CDD:275380
		leucine-rich repeat	339..363	CDD:275380
		LRRCT	395..445	CDD:214507
lrrc4.2	NP_001093494.1	leucine-rich repeat	71..94	CDD:275380
		LRR_8	72..129	CDD:290566
		LRR_RI	74..>276	CDD:238064
		leucine-rich repeat	95..118	CDD:275380
		leucine-rich repeat	119..142	CDD:275380
		LRR_8	141..202	CDD:290566
		leucine-rich repeat	143..166	CDD:275380
		leucine-rich repeat	167..191	CDD:275380
		leucine-rich repeat	192..213	CDD:275380
		LRR_8	213..272	CDD:290566
		leucine-rich repeat	214..237	CDD:275380
		leucine-rich repeat	238..261	CDD:275380
		leucine-rich repeat	262..283	CDD:275380
		LRRCT	294..345	CDD:214507
		IG_like	353..435	CDD:214653
		Ig	365..435	CDD:299845

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910