Protein Alignment caps and si:dkey-90m5.4

DIOPT Version :10

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_001038237.1
• Gene: si:dkey-90m5.4 / 553466
• ZFINID: ZDB-GENE-041014-250
• Length: 327
• Species: Danio rerio
• Alignment Length: 439
• Identity: 104/439 - (23%)
• Similarity: 160/439 - (36%)
• Gaps: 128/439 - (29%)

  Fly    15 LGQAFSLCLCLCLCLVLATLPVALGLANCPNGCEC--DDDTLMVNCGEGTLDVLP-IALNPAIQR 76
            |.:|.::.|.||          :....:||..|.|  ...|..|.|.:..|...| ..|.|:...
Zfish     5 LVRALAVMLVLC----------SRDALSCPKRCTCHFSAKTTEVVCPDAGLSHFPGDGLPPSTTS 59

  Fly    77 LVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLG 141
            |.|:...|..:.|               ..:..:|        .|:||||..||:..:.......
Zfish    60 LTIQFTNLTVLTS---------------EHLRAVP--------LLEELHLPGNKLSSLPADILKD 101

  Fly   142 LSTISVLNLRGNLIAELEYRTF--SPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLT 204
            |..:..::|..|.:.||....|  :|::.|.   |..||||:|.|   |...|
Zfish   102 LKYLHTIDLTDNELRELPEYVFRHAPLLNLV---LKDNRISNIHP---DWFPN------------ 148

  Fly   205 TVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFL 269
                                 ||                                     :|.:|
Zfish   149 ---------------------NS-------------------------------------NLTWL 155

  Fly   270 DLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFS 334
            |||.|:|...|.|..|.|..|:.|::.||..|.:..|.......|..|.| ...:::.::..|||
Zfish   156 DLSGNQLMKFPMAQLQNLRHLKVLHLSQNKIEELPVGCLDAHTALERLYL-DQNKIQTLDVKAFS 219

  Fly   335 GNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQT--LDLSENPF 397
            |:|||.|:.|..|: ::.|.......|..|..|.|..|:|..|..|::   |:.|  ::|:.||:
Zfish   220 GSTNLTHIFLQKNR-IDSLPPTVFQELKRLEYVDLSDNRLQFLSPGIL---DINTSWVELTFNPW 280

  Fly   398 ECDCRL--LWLRHLLVSRNASGQYAPVICAYPTALRDLPLAHLAEPLLG 444
            .||.::  ||.:..:.|..:..:     ||.|..|:|..:|.|....:|
Zfish   281 HCDAKIEYLWRKITMESLQSEPK-----CAAPENLKDRVIATLTRKDMG 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	4/20 (20%)
		LRR_8	96..155	CDD:404697	11/58 (19%)
		leucine-rich repeat	97..120	CDD:275380	1/22 (5%)
		leucine-rich repeat	121..144	CDD:275380	8/22 (36%)
		LRR	135..>398	CDD:443914	63/266 (24%)
		leucine-rich repeat	145..168	CDD:275380	6/24 (25%)
		leucine-rich repeat	169..192	CDD:275380	9/22 (41%)
		leucine-rich repeat	193..217	CDD:275380	0/23 (0%)
		leucine-rich repeat	218..241	CDD:275380	2/22 (9%)
		leucine-rich repeat	242..265	CDD:275380	0/22 (0%)
		leucine-rich repeat	266..289	CDD:275380	11/22 (50%)
		leucine-rich repeat	290..313	CDD:275380	6/22 (27%)
		leucine-rich repeat	314..335	CDD:275380	5/20 (25%)
		leucine-rich repeat	339..363	CDD:275380	6/23 (26%)
		LRRCT	395..445	CDD:214507	15/52 (29%)
si:dkey-90m5.4	NP_001038237.1	leucine-rich repeat	57..80	CDD:275380	5/45 (11%)
		LRR	<65..>262	CDD:443914	66/297 (22%)
		leucine-rich repeat	81..104	CDD:275380	8/22 (36%)
		leucine-rich repeat	105..126	CDD:275380	5/20 (25%)
		leucine-rich repeat	128..151	CDD:275380	12/98 (12%)
		leucine-rich repeat	152..175	CDD:275380	11/22 (50%)
		leucine-rich repeat	176..199	CDD:275380	6/22 (27%)
		leucine-rich repeat	200..223	CDD:275380	7/23 (30%)
		leucine-rich repeat	224..247	CDD:275380	6/23 (26%)
		leucine-rich repeat	248..271	CDD:275380	8/25 (32%)
		LRRCT	278..319	CDD:214507	13/45 (29%)