Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001032440.1 | Gene: | Lrrn1 / 500280 | RGDID: | 1564145 | Length: | 716 | Species: | Rattus norvegicus |
Alignment Length: | 408 | Identity: | 107/408 - (26%) |
---|---|---|---|
Similarity: | 181/408 - (44%) | Gaps: | 48/408 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 ANCPNGCECD-----------DDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKL-KTIDSSMQF 93
Fly 94 YAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAEL 158
Fly 159 EYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYL 223
Fly 224 GTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLG 288
Fly 289 RLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNEL 353
Fly 354 SSIALGGLPHLSTVVLKANQLSSLDEGLV-PWADLQTLDLSENPFECDCRLLWLRHLLVSRNASG 417
Fly 418 ----QYAPVICAYPTALR 431 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 7/21 (33%) |
LRR_8 | 96..155 | CDD:290566 | 19/58 (33%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 143..201 | CDD:290566 | 16/57 (28%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 5/22 (23%) | ||
LRR_RI | 147..397 | CDD:238064 | 64/250 (26%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 3/23 (13%) | ||
LRR_8 | 217..276 | CDD:290566 | 20/58 (34%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 265..321 | CDD:290566 | 17/55 (31%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 312..374 | CDD:290566 | 14/61 (23%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 5/23 (22%) | ||
LRRCT | 395..445 | CDD:214507 | 11/41 (27%) | ||
Lrrn1 | NP_001032440.1 | leucine-rich repeat | 54..73 | CDD:275380 | 5/18 (28%) |
LRR | <68..372 | CDD:227223 | 88/329 (27%) | ||
LRR 1 | 73..95 | 7/21 (33%) | |||
leucine-rich repeat | 74..96 | CDD:275380 | 7/22 (32%) | ||
LRR 2 | 96..117 | 8/20 (40%) | |||
leucine-rich repeat | 97..120 | CDD:275380 | 9/22 (41%) | ||
LRR 3 | 120..141 | 6/20 (30%) | |||
leucine-rich repeat | 121..144 | CDD:275380 | 7/22 (32%) | ||
LRR 4 | 144..165 | 4/20 (20%) | |||
leucine-rich repeat | 145..168 | CDD:275380 | 5/22 (23%) | ||
LRR 5 | 168..189 | 6/20 (30%) | |||
leucine-rich repeat | 169..192 | CDD:275380 | 7/22 (32%) | ||
LRR 6 | 192..213 | 7/45 (16%) | |||
leucine-rich repeat | 193..216 | CDD:275380 | 7/47 (15%) | ||
LRR 7 | 216..237 | 9/20 (45%) | |||
leucine-rich repeat | 217..240 | CDD:275380 | 11/22 (50%) | ||
LRR 8 | 240..261 | 8/20 (40%) | |||
leucine-rich repeat | 241..264 | CDD:275380 | 8/22 (36%) | ||
LRR 9 | 264..285 | 6/20 (30%) | |||
leucine-rich repeat | 265..288 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 289..313 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 339..362 | CDD:275378 | 5/22 (23%) | ||
leucine-rich repeat | 363..375 | CDD:275378 | 3/11 (27%) | ||
LRRCT | 371..419 | CDD:214507 | 11/41 (27%) | ||
I-set | 429..516 | CDD:400151 | |||
Ig strand A' | 433..438 | CDD:409353 | |||
Ig strand B | 441..450 | CDD:409353 | |||
Ig strand C | 456..460 | CDD:409353 | |||
Ig strand C' | 463..465 | CDD:409353 | |||
Ig strand D | 478..481 | CDD:409353 | |||
Ig strand E | 482..487 | CDD:409353 | |||
Ig strand F | 495..503 | CDD:409353 | |||
Ig strand G | 506..516 | CDD:409353 | |||
FN3 | 531..600 | CDD:214495 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 691..716 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 161 | 1.000 | Inparanoid score | I4127 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8997 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103993 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.860 |