Protein Alignment caps and CG7800

DIOPT Version :10

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_649770.1
• Gene: CG7800 / 40963
• FlyBaseID: FBgn0037552
• Length: 533
• Species: Drosophila melanogaster
• Alignment Length: 417
• Identity: 109/417 - (26%)
• Similarity: 185/417 - (44%)
• Gaps: 62/417 - (14%)

  Fly    68 IALNPAIQRLVIKNNKLKTIDSSMQFYAQ---LTFLDLSFNDMLTIPERSFAYHAKLQELHLDHN 129
            :.|.|.::.|.::|  ..:.|.:|....|   ||.|.|...::|.:.:..|:....::.|.|..|
  Fly    59 LKLMPNLRTLELEN--CDSPDFTMNDLNQLPYLTSLQLRRGNLLGLHDEHFSKWPNMKILMLGGN 121

  Fly   130 KIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLR 194
            .|.::||:.|.||:.:.:|:|.||.|..|.:..|..:.:|..|:|..|||..:..:...|:..|.
  Fly   122 NITRLSNECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPELLHLDLSGNRIETLHENIFTGVPKLE 186

  Fly   195 VLYLDDNTLTTVPGELTFQALHSLAELYL------GTNSFMTIPGG--AFQDLKGLTRLDLRG-- 249
            :|.|:.|.||.:..    .:|.||:.|.|      |....:::||.  ...|..|:.|||:.|
  Fly   187 MLLLNGNPLTWIAP----TSLKSLSNLRLLDMSNCGPLPDLSLPGAHTLILDNSGVQRLDILGSV 247

  Fly   250 ----AGLHNISGDALKGLVSLRFLDLSDNRLPA--IPTAAFQRLGRLEQLNIGQNDFEVISSGAF 308
                |..::|:...|....|:..|||..|.|.|  || .....:.||::|::.:|   :|...|.
  Fly   248 HKLQARKNHITEIKLPDKSSVIELDLHSNLLTATDIP-KLLTGMWRLQRLDLSEN---IIGIYAA 308

  Fly   309 SG---------LRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHL 364
            :|         |..|.::.|: |.||.|:...:......|.||:.|.|: :...:.:.:....:|
  Fly   309 AGSDNTSELFILPNLMYMNLS-ANRLTRLHFDSPIPWERLTHLDASYNR-IYAPAKVGIDEAFNL 371

  Fly   365 STVVLKANQLSSLDEGLVPW---ADLQTLDLSENPF-------------ECDCRLLWLRHLLVSR 413
            .::.|:.|.:::.:  |.||   ..|:.:.|.:|.|             |....:|.......|.
  Fly   372 QSLHLEGNYINNFE--LTPWKPHPSLKEVALYDNKFQPKGYKNITKFFNEIGVNVLEKTQYSQSN 434

  Fly   414 NASGQYAPVICAYPTALRDLPLAHLAE 440
            |.:....|.|   |.| ||.|.:..|:
  Fly   435 NTTPTCKPCI---PDA-RDFPTSISAD 457

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	4/20 (20%)
		LRR_8	96..155	CDD:404697	20/61 (33%)
		leucine-rich repeat	97..120	CDD:275380	6/22 (27%)
		leucine-rich repeat	121..144	CDD:275380	9/22 (41%)
		LRR	135..>398	CDD:443914	80/303 (26%)
		leucine-rich repeat	145..168	CDD:275380	7/22 (32%)
		leucine-rich repeat	169..192	CDD:275380	7/22 (32%)
		leucine-rich repeat	193..217	CDD:275380	7/23 (30%)
		leucine-rich repeat	218..241	CDD:275380	7/30 (23%)
		leucine-rich repeat	242..265	CDD:275380	7/28 (25%)
		leucine-rich repeat	266..289	CDD:275380	8/24 (33%)
		leucine-rich repeat	290..313	CDD:275380	7/31 (23%)
		leucine-rich repeat	314..335	CDD:275380	6/20 (30%)
		leucine-rich repeat	339..363	CDD:275380	5/23 (22%)
		LRRCT	395..445	CDD:214507	14/59 (24%)
CG7800	NP_649770.1	leucine-rich repeat	46..64	CDD:275380	1/4 (25%)
		leucine-rich repeat	65..85	CDD:275380	4/21 (19%)
		LRR	68..482	CDD:443914	107/408 (26%)
		leucine-rich repeat	89..112	CDD:275380	6/22 (27%)
		leucine-rich repeat	113..136	CDD:275380	9/22 (41%)
		leucine-rich repeat	137..160	CDD:275380	7/22 (32%)
		leucine-rich repeat	161..184	CDD:275380	7/22 (32%)
		leucine-rich repeat	185..208	CDD:275380	9/26 (35%)
		leucine-rich repeat	209..246	CDD:275380	10/36 (28%)
		leucine-rich repeat	247..267	CDD:275380	3/19 (16%)
		leucine-rich repeat	268..292	CDD:275380	8/24 (33%)
		leucine-rich repeat	293..322	CDD:275380	7/31 (23%)
		leucine-rich repeat	395..406	CDD:275378	3/10 (30%)