Protein Alignment caps and CG4781

DIOPT Version :10

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_611951.1
• Gene: CG4781 / 37943
• FlyBaseID: FBgn0035043
• Length: 469
• Species: Drosophila melanogaster
• Alignment Length: 448
• Identity: 111/448 - (24%)
• Similarity: 179/448 - (39%)
• Gaps: 86/448 - (19%)

  Fly    42 NCPNGCECDDDTLMVNCGEGTLDVLPIALNP---AIQRLVIKNNKLKTIDSSMQFYAQLTFLDLS 103
            |....|||.:                ::.:|   ...|:.......|..|.|:.....:..||||
  Fly    46 NSRRSCECSN----------------VSASPWGNRALRIDCSYKDYKVADLSLLLPLYIDSLDLS 94

  Fly   104 FNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVK 168
            :|.:.::|   ......|.:|:|.||.|.|:               :.||         |..:..
  Fly    95 WNALDSVP---IFTSDSLHQLNLRHNNISQL---------------VSGN---------FKQLTS 132

  Fly   169 LAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPG 233
            |.||.||.|.|..::..:.|||.:|:||.|..|.|..:||.| |..|..|..|.:..|......|
  Fly   133 LRELYLGWNSIGKLESGSFDGLPHLQVLDLAHNNLHLLPGHL-FAPLLVLGTLDISWNRRFNESG 196

  Fly   234 GAFQDLKG----LTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLN 294
            |......|    |:.|.|....|:::.   |.....|:.|.|..|:|..|||...:.|.||:
  Fly   197 GDLYTGLGVNWKLSTLRLDACSLNDLH---LPVNAPLKELSLRRNQLKRIPTQLPETLLRLD--- 255

  Fly   295 IGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALG 359
            |..|..|.:.....:.|.::|.|.:.....|:||.:.:.:....||.|:..:::||:.|.:.|.|
  Fly   256 ISDNLLEELLPEDTANLTQVRQLFIEDMPVLQRVVANSLTHVDVLETLSFQNSRQLSHLDAEAFG 320

  Fly   360 GLPHLST---------VVLKANQLSSLDEGLVP-WADLQTLDLSENPFECDCRLLWLRHLLVSRN 414
              |.::|         :..:...|.:.:..|.| :..|..|||:..|.:|||.|:||:.|.|..|
  Fly   321 --PIMTTPTKKRALRSLSFRGTMLRTFNSTLAPIFTQLAELDLNGLPLQCDCELVWLKQLPVQTN 383

  Fly   415 ASGQYAPVICAYPTALRDLPLAHLAEPLLGC------AHGAASKQAIIGILVVACAAL 466
            ..       |..|..:|.:.:.........|      |:|.    .::.::.::.|.:
  Fly   384 GR-------CYKPARIRGMLVTSARGDAFSCDTWPRWAYGL----VVLSLIALSAAGI 430

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	4/20 (20%)
		LRR_8	96..155	CDD:404697	15/58 (26%)
		leucine-rich repeat	97..120	CDD:275380	6/22 (27%)
		leucine-rich repeat	121..144	CDD:275380	7/22 (32%)
		LRR	135..>398	CDD:443914	73/276 (26%)
		leucine-rich repeat	145..168	CDD:275380	3/22 (14%)
		leucine-rich repeat	169..192	CDD:275380	10/22 (45%)
		leucine-rich repeat	193..217	CDD:275380	11/23 (48%)
		leucine-rich repeat	218..241	CDD:275380	5/22 (23%)
		leucine-rich repeat	242..265	CDD:275380	5/22 (23%)
		leucine-rich repeat	266..289	CDD:275380	9/22 (41%)
		leucine-rich repeat	290..313	CDD:275380	5/22 (23%)
		leucine-rich repeat	314..335	CDD:275380	5/20 (25%)
		leucine-rich repeat	339..363	CDD:275380	8/23 (35%)
		LRRCT	395..445	CDD:214507	13/49 (27%)
CG4781	NP_611951.1	LRR	<90..367	CDD:443914	86/312 (28%)
		leucine-rich repeat	90..108	CDD:275380	6/20 (30%)
		leucine-rich repeat	109..132	CDD:275380	10/46 (22%)
		leucine-rich repeat	133..156	CDD:275380	10/22 (45%)
		leucine-rich repeat	157..180	CDD:275380	11/23 (48%)
		leucine-rich repeat	181..208	CDD:275380	6/26 (23%)
		leucine-rich repeat	230..253	CDD:275380	9/22 (41%)
		leucine-rich repeat	254..274	CDD:275380	5/22 (23%)
		leucine-rich repeat	275..299	CDD:275380	5/23 (22%)
		leucine-rich repeat	300..319	CDD:275380	6/18 (33%)