DRSC/TRiP Functional Genomics Resources

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Protein Alignment caps and Gp150

DIOPT Version :9

Sequence 1:NP_001303391.1 Gene:caps / 39493 FlyBaseID:FBgn0023095 Length:811 Species:Drosophila melanogaster
Sequence 2:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster


Alignment Length:476 Identity:120/476 - (25%)
Similarity:190/476 - (39%) Gaps:118/476 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 CPNGCECD---DDTLMVNC----------GEGTLDVL--------PIALNP-AIQRLVIKN-NKL 84
            ||..|:|.   :..|:..|          |....|::        ||.:.| ..|.|.:|| ..:
  Fly   258 CPRFCQCARNVNSYLVATCSRLDMGIQKFGSDITDLVVTNVGPKYPILMGPNFFQNLGLKNVASI 322

  Fly    85 KTIDSSMQF------------YA--------------------QLTFLDLSFNDMLTIPERSFAY 117
            |..:.::::            ||                    :|..|.:|.||:..:  .|..|
  Fly   323 KIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVM--SSIHY 385

  Fly   118 HAK---LQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRI 179
            ..|   ::||....|.:.:::.|.|..||.:..:||..|.:.:|..:.|..:..|.||:|..|.:
  Fly   386 LLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSL 450

  Fly   180 SHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTR 244
            :.:.....:| ..|.:|:|..||..   |:|.| ....|.:|.|..||.:.:....|..:.|||.
  Fly   451 TELPRDIFNG-TTLSILHLKYNTFN---GDLHF-GTKDLQQLDLSFNSIVQVHHSMFDKMPGLTN 510

  Fly   245 LDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQN----------- 298
            |:|:|.|:..|..|:...|.:||.:|||.|.|..|....|.:...|:.:.:..|           
  Fly   511 LNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGF 575

  Fly   299 -----DFEV------------ISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSS 346
                 :|.|            :...|||.:..|..|:|.. ..:..:....|:|...|..|:||:
  Fly   576 LSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAW-NNINHLPREIFTGLHKLIDLDLSN 639

  Fly   347 N--KQLNELSSIALGGLPHLSTVVLKANQLSSLDEGL-VPWADLQTLDLSENPFECDCRLLWL-- 406
            |  .::::|..:..|.|..||   |..|.:|.|...| :|...|:.||::      ||.|..|  
  Fly   640 NLITRMDDLIFMDNGELTKLS---LAGNPISRLSVRLFLPLHQLRCLDVN------DCELTTLLS 695

  Fly   407 -RHL---------LVSRNASG 417
             |.|         |.|.||||
  Fly   696 DRDLGAGYKIFDSLRSFNASG 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capsNP_001303391.1 leucine-rich repeat 75..96 CDD:275380 7/53 (13%)
LRR_8 96..155 CDD:290566 18/61 (30%)
leucine-rich repeat 97..120 CDD:275380 7/22 (32%)
leucine-rich repeat 121..144 CDD:275380 6/22 (27%)
LRR_8 143..201 CDD:290566 15/57 (26%)
leucine-rich repeat 145..168 CDD:275380 5/22 (23%)
LRR_RI 147..397 CDD:238064 75/280 (27%)
leucine-rich repeat 169..192 CDD:275380 6/22 (27%)
leucine-rich repeat 193..217 CDD:275380 8/23 (35%)
LRR_8 217..276 CDD:290566 22/58 (38%)
leucine-rich repeat 218..241 CDD:275380 6/22 (27%)
leucine-rich repeat 242..265 CDD:275380 9/22 (41%)
LRR_8 265..321 CDD:290566 19/83 (23%)
leucine-rich repeat 266..289 CDD:275380 9/22 (41%)
leucine-rich repeat 290..313 CDD:275380 7/50 (14%)
LRR_8 312..374 CDD:290566 17/63 (27%)
leucine-rich repeat 314..335 CDD:275380 4/20 (20%)
leucine-rich repeat 339..363 CDD:275380 8/25 (32%)
LRRCT 395..445 CDD:214507 12/35 (34%)
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 9/59 (15%)
leucine-rich repeat 343..366 CDD:275380 2/22 (9%)
leucine-rich repeat 367..391 CDD:275380 8/25 (32%)
LRR_RI <374..619 CDD:238064 66/252 (26%)
LRR_8 390..450 CDD:290566 17/59 (29%)
leucine-rich repeat 393..415 CDD:275380 6/21 (29%)
leucine-rich repeat 416..439 CDD:275380 5/22 (23%)
leucine-rich repeat 440..483 CDD:275380 14/47 (30%)
leucine-rich repeat 463..481 CDD:275380 8/21 (38%)
LRR_8 484..542 CDD:290566 22/57 (39%)
leucine-rich repeat 484..507 CDD:275380 6/22 (27%)
leucine-rich repeat 508..531 CDD:275380 9/22 (41%)
leucine-rich repeat 532..569 CDD:275380 11/36 (31%)
leucine-rich repeat 556..583 CDD:275380 2/26 (8%)
leucine-rich repeat 570..607 CDD:275380 5/36 (14%)
LRR_RI <586..745 CDD:238064 39/141 (28%)
LRR_8 606..666 CDD:290566 17/63 (27%)
leucine-rich repeat 608..631 CDD:275380 5/23 (22%)
leucine-rich repeat 632..655 CDD:275380 6/22 (27%)
leucine-rich repeat 656..674 CDD:275380 7/20 (35%)
leucine-rich repeat 733..745 CDD:275378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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