Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477049.2 | Gene: | Gp150 / 37549 | FlyBaseID: | FBgn0013272 | Length: | 1076 | Species: | Drosophila melanogaster |
Alignment Length: | 476 | Identity: | 120/476 - (25%) |
---|---|---|---|
Similarity: | 190/476 - (39%) | Gaps: | 118/476 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 CPNGCECD---DDTLMVNC----------GEGTLDVL--------PIALNP-AIQRLVIKN-NKL 84
Fly 85 KTIDSSMQF------------YA--------------------QLTFLDLSFNDMLTIPERSFAY 117
Fly 118 HAK---LQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRI 179
Fly 180 SHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTR 244
Fly 245 LDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQN----------- 298
Fly 299 -----DFEV------------ISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSS 346
Fly 347 N--KQLNELSSIALGGLPHLSTVVLKANQLSSLDEGL-VPWADLQTLDLSENPFECDCRLLWL-- 406
Fly 407 -RHL---------LVSRNASG 417 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 7/53 (13%) |
LRR_8 | 96..155 | CDD:290566 | 18/61 (30%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 143..201 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 5/22 (23%) | ||
LRR_RI | 147..397 | CDD:238064 | 75/280 (27%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 217..276 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 265..321 | CDD:290566 | 19/83 (23%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 7/50 (14%) | ||
LRR_8 | 312..374 | CDD:290566 | 17/63 (27%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 4/20 (20%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 8/25 (32%) | ||
LRRCT | 395..445 | CDD:214507 | 12/35 (34%) | ||
Gp150 | NP_477049.2 | LRR_8 | 317..377 | CDD:290566 | 9/59 (15%) |
leucine-rich repeat | 343..366 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 367..391 | CDD:275380 | 8/25 (32%) | ||
LRR_RI | <374..619 | CDD:238064 | 66/252 (26%) | ||
LRR_8 | 390..450 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 393..415 | CDD:275380 | 6/21 (29%) | ||
leucine-rich repeat | 416..439 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 440..483 | CDD:275380 | 14/47 (30%) | ||
leucine-rich repeat | 463..481 | CDD:275380 | 8/21 (38%) | ||
LRR_8 | 484..542 | CDD:290566 | 22/57 (39%) | ||
leucine-rich repeat | 484..507 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 508..531 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 532..569 | CDD:275380 | 11/36 (31%) | ||
leucine-rich repeat | 556..583 | CDD:275380 | 2/26 (8%) | ||
leucine-rich repeat | 570..607 | CDD:275380 | 5/36 (14%) | ||
LRR_RI | <586..745 | CDD:238064 | 39/141 (28%) | ||
LRR_8 | 606..666 | CDD:290566 | 17/63 (27%) | ||
leucine-rich repeat | 608..631 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 632..655 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 656..674 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 733..745 | CDD:275378 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR45617 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |