Protein Alignment caps and conv

DIOPT Version :10

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_610948.2
• Gene: conv / 36588
• FlyBaseID: FBgn0261269
• Length: 1092
• Species: Drosophila melanogaster
• Alignment Length: 433
• Identity: 123/433 - (28%)
• Similarity: 190/433 - (43%)
• Gaps: 77/433 - (17%)

  Fly    55 MVNCGEGTLDVLPIA-----LNPAIQRLVIKNNKLKTI------DSSMQFYAQLTF--------- 99
            ::|.....|:::..|     :|  |..|.:.:|:|...      :::...|.||::
  Fly   369 IINVSHNALELIETAAFENCVN--ITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQI 431

  Fly   100 ----------LDLSFNDMLTIPERSFAYHAKLQELH---LDHNKIGQVSNKTFLGLSTISVLNLR 151
                      |:.|:|.:..||:..|   .||.|||   :.||.|..:.|..|..|.::..::|.
  Fly   432 PIQNMTGLKVLNASYNSITEIPKNCF---PKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLS 493

  Fly   152 GNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALH 216
            .|.:.|::..||..:..|.|::|..|.:..:...:|..|.:||.|||::|.|     |..||...
  Fly   494 HNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQL-----EKLFQLPI 553

  Fly   217 SLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHN-----ISGDALKGLVSLRFLDLSDNRL 276
            ||.|||...|....||.|.:..:..|..|||.    ||     ::|::..||:.::.|.|.:|.:
  Fly   554 SLNELYFSHNRLTNIPSGTWPVMNSLIYLDLS----HNQLGDTLNGESFTGLLVVQRLKLQNNGI 614

  Fly   277 PAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEH 341
            ...|..|...:..|:.|::..|:...:...||..|..|..|.|.|.| ::.:...||.|...|..
  Fly   615 SQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQ-VKDISKRAFEGLLQLLT 678

  Fly   342 LNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEG----LVPWADLQTLDLSENPFECDCR 402
            |||||| .:..|.:....|||.|..:.|..|.|:.||..    |.....|:|||||.|
  Fly   679 LNLSSN-GIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHN------- 735

  Fly   403 LLWLRHLLVSRNA--SGQYAPVICAYPTALRDLPLAHLAEPLL 443
                |...|::..  |.||.|.      .||:|.|::...|:|
  Fly   736 ----RISFVTKKTFPSHQYIPY------NLRNLNLSYNLMPIL 768

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	4/26 (15%)
		LRR_8	96..155	CDD:404697	21/80 (26%)
		leucine-rich repeat	97..120	CDD:275380	7/41 (17%)
		leucine-rich repeat	121..144	CDD:275380	10/25 (40%)
		LRR	135..>398	CDD:443914	86/271 (32%)
		leucine-rich repeat	145..168	CDD:275380	5/22 (23%)
		leucine-rich repeat	169..192	CDD:275380	6/22 (27%)
		leucine-rich repeat	193..217	CDD:275380	10/23 (43%)
		leucine-rich repeat	218..241	CDD:275380	8/22 (36%)
		leucine-rich repeat	242..265	CDD:275380	9/27 (33%)
		leucine-rich repeat	266..289	CDD:275380	5/22 (23%)
		leucine-rich repeat	290..313	CDD:275380	6/22 (27%)
		leucine-rich repeat	314..335	CDD:275380	7/20 (35%)
		leucine-rich repeat	339..363	CDD:275380	10/23 (43%)
		LRRCT	395..445	CDD:214507	13/51 (25%)
conv	NP_610948.2	leucine-rich repeat	125..148	CDD:275380
		leucine-rich repeat	150..175	CDD:275380
		leucine-rich repeat	176..199	CDD:275380
		PPP1R42	191..359	CDD:455733
		LRR_8	198..258	CDD:404697
		leucine-rich repeat	200..223	CDD:275380
		leucine-rich repeat	224..271	CDD:275380
		leucine-rich repeat	272..295	CDD:275380
		leucine-rich repeat	296..319	CDD:275380
		leucine-rich repeat	322..343	CDD:275380
		leucine-rich repeat	344..367	CDD:275380
		LRR	346..718	CDD:443914	103/364 (28%)
		leucine-rich repeat	371..390	CDD:275380	3/18 (17%)
		leucine-rich repeat	391..414	CDD:275380	4/22 (18%)
		leucine-rich repeat	416..438	CDD:275380	3/21 (14%)
		leucine-rich repeat	439..462	CDD:275380	8/25 (32%)
		leucine-rich repeat	463..486	CDD:275380	8/22 (36%)
		leucine-rich repeat	487..510	CDD:275380	5/22 (23%)
		leucine-rich repeat	511..534	CDD:275380	6/22 (27%)
		leucine-rich repeat	535..554	CDD:275380	10/23 (43%)
		leucine-rich repeat	555..578	CDD:275380	8/22 (36%)
		leucine-rich repeat	579..603	CDD:275380	9/27 (33%)
		leucine-rich repeat	604..627	CDD:275380	5/22 (23%)
		leucine-rich repeat	628..649	CDD:275380	5/20 (25%)
		PPP1R42	631..849	CDD:455733	50/157 (32%)
		leucine-rich repeat	652..672	CDD:275380	7/20 (35%)
		leucine-rich repeat	700..726	CDD:275380	7/25 (28%)
		leucine-rich repeat	727..745	CDD:275380	9/28 (32%)
		leucine-rich repeat	779..802	CDD:275380
		leucine-rich repeat	829..852	CDD:275380