| Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
| Alignment Length: | 844 | Identity: | 199/844 - (23%) |
|---|---|---|---|
| Similarity: | 300/844 - (35%) | Gaps: | 229/844 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 19 FSLCLCLCLCLVLATLPVALG--LANCPNGCEC--DD-DTLMVNCGEGTLDVL------------ 66
Fly 67 --------PIALNPAIQRLVIKNNKLKTIDSSM------QFYA--QLTFLDLSFNDMLTIPERSF 115
Fly 116 AYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRIS 180
Fly 181 HIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRL 245
Fly 246 DLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFE--------- 301
Fly 302 -------VISSGAFSGLRELR--------------------------HLELTGAQRLRRVESGAF 333
Fly 334 SGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLV-PWADLQTLDLSENPF 397
Fly 398 ECD-CRLLWLRHLLVSRNASGQYAPVICAYPTALRDLPLAHL-AEPLLGC--------------- 445
Fly 446 ----AHGAASKQAII-GILVVACAALITTLALVLYTCRHRIREMLKGHSALGRKEREYQKTFSDE 505
Fly 506 EYMSRPPPGGGGVHPAAGGYPYIAGNSRMIPVTELXLEAPPPPQLRGRGGGGGASTASGAVQQLQ 570
Fly 571 VPSAVDQASNSFAQLSHIHYMTNNGQQQQAQQQQSTSKMHHSQQDMRLLACNGGKPLNATSLPRH 635
Fly 636 RPPVVQESTLSHYSQPLANGIRLTQDHFNHNQNQ-----SHNQHYGGVYAKPCDAMS--EPGYIH 693
Fly 694 NNSHYSLPLDHDLPPSPTPTP--------PPPALP--------------LRNGVGMALIHGNTT 735 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 6/28 (21%) |
| LRR_8 | 96..155 | CDD:290566 | 22/58 (38%) | ||
| leucine-rich repeat | 97..120 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 121..144 | CDD:275380 | 9/22 (41%) | ||
| LRR_8 | 143..201 | CDD:290566 | 17/57 (30%) | ||
| leucine-rich repeat | 145..168 | CDD:275380 | 9/22 (41%) | ||
| LRR_RI | 147..397 | CDD:238064 | 74/292 (25%) | ||
| leucine-rich repeat | 169..192 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 193..217 | CDD:275380 | 5/23 (22%) | ||
| LRR_8 | 217..276 | CDD:290566 | 22/58 (38%) | ||
| leucine-rich repeat | 218..241 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 265..321 | CDD:290566 | 23/97 (24%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 6/38 (16%) | ||
| LRR_8 | 312..374 | CDD:290566 | 16/87 (18%) | ||
| leucine-rich repeat | 314..335 | CDD:275380 | 4/46 (9%) | ||
| leucine-rich repeat | 339..363 | CDD:275380 | 7/23 (30%) | ||
| LRRCT | 395..445 | CDD:214507 | 14/51 (27%) | ||
| rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | 4/22 (18%) |
| leucine-rich repeat | 108..131 | CDD:275380 | 9/22 (41%) | ||
| LRR_8 | 131..190 | CDD:290566 | 22/58 (38%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 9/22 (41%) | ||
| LRR_RI | 151..422 | CDD:238064 | 69/275 (25%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 9/22 (41%) | ||
| LRR_8 | 178..262 | CDD:290566 | 24/84 (29%) | ||
| leucine-rich repeat | 180..203 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 204..251 | CDD:275380 | 14/47 (30%) | ||
| leucine-rich repeat | 252..275 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 274..334 | CDD:290566 | 17/59 (29%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 11/22 (50%) | ||
| LRR_4 | 298..342 | CDD:289563 | 8/43 (19%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 3/22 (14%) | ||
| leucine-rich repeat | 388..411 | CDD:275380 | 7/23 (30%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45453576 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.840 | |||||