Protein Alignment caps and CG16974

DIOPT Version :10

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: NP_609610.2
• Gene: CG16974 / 34713
• FlyBaseID: FBgn0032479
• Length: 1257
• Species: Drosophila melanogaster
• Alignment Length: 418
• Identity: 117/418 - (27%)
• Similarity: 181/418 - (43%)
• Gaps: 73/418 - (17%)

  Fly    48 ECDDDTLM---------------VNCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDSSMQFYAQL 97
            |..|:|||               :|..|..|:.|..|:..|::|:.:
  Fly   185 ELKDETLMELFTRQPRSFEYMERLNLAENRLECLHWAIPLAVRRVKV------------------ 231

  Fly    98 TFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLG-LSTISVLNLRGNLIAELEYR 161
              |::|.|.:......:..|..:|||||||.:::..:..: ||| ||.:.:|||..||:.||...
  Fly   232 --LEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQR-FLGELSELRMLNLSQNLLTELPRD 293

  Fly   162 TFSPMVKLAELNLGQNRISHI---------DPHALDGLDN---------------LRVLYLDDNT 202
            .|...:||..|.|..||:|.:         |...||..||               ||.|:|..|.
  Fly   294 IFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQ 358

  Fly   203 LTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLR 267
            |.:: |:.:..:|..|.:|.|..||...|...||:.|..|..|::.|..|..:|....:.|.:||
  Fly   359 LKSI-GKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALR 422

  Fly   268 FLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAF---------SGLRELRHLELTGAQ 323
            .||||.|:...:|:..|||...|..|.|.:...|..|:...         ..|..||:|.:...:
  Fly   423 QLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNR 487

  Fly   324 RLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQ 388
            :|..:.:..|:...|:..|.|:.|..|...:.|:  ||..|..:.::.|.|.||.|.:.....|.
  Fly   488 KLTYLPATLFANTPNIRELLLAENGLLQLPTQIS--GLSRLQRLSVRGNSLGSLPENIKELRQLH 550

  Fly   389 TLDLSENPFECDCRLLWLRHLLVSRNAS 416
            .|::..|.::|||.:.||...|.:.:.|
  Fly   551 YLNILGNEYQCDCSMYWLTAWLANTSTS 578

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	1/20 (5%)
		LRR_8	96..155	CDD:404697	20/59 (34%)
		leucine-rich repeat	97..120	CDD:275380	4/22 (18%)
		leucine-rich repeat	121..144	CDD:275380	11/23 (48%)
		LRR	135..>398	CDD:443914	87/296 (29%)
		leucine-rich repeat	145..168	CDD:275380	8/22 (36%)
		leucine-rich repeat	169..192	CDD:275380	9/31 (29%)
		leucine-rich repeat	193..217	CDD:275380	8/23 (35%)
		leucine-rich repeat	218..241	CDD:275380	9/22 (41%)
		leucine-rich repeat	242..265	CDD:275380	6/22 (27%)
		leucine-rich repeat	266..289	CDD:275380	11/22 (50%)
		leucine-rich repeat	290..313	CDD:275380	6/31 (19%)
		leucine-rich repeat	314..335	CDD:275380	5/20 (25%)
		leucine-rich repeat	339..363	CDD:275380	7/23 (30%)
		LRRCT	395..445	CDD:214507	8/22 (36%)
CG16974	NP_609610.2	leucine-rich repeat	206..228	CDD:275380	6/21 (29%)
		leucine-rich repeat	229..252	CDD:275380	4/42 (10%)
		LRR	<230..531	CDD:443914	90/324 (28%)
		leucine-rich repeat	253..276	CDD:275380	11/23 (48%)
		leucine-rich repeat	277..300	CDD:275380	8/22 (36%)
		leucine-rich repeat	301..324	CDD:275380	6/22 (27%)
		leucine-rich repeat	325..348	CDD:275380	4/22 (18%)
		leucine-rich repeat	349..372	CDD:275380	8/23 (35%)
		leucine-rich repeat	373..396	CDD:275380	9/22 (41%)
		leucine-rich repeat	397..420	CDD:275380	6/22 (27%)
		leucine-rich repeat	421..444	CDD:275380	11/22 (50%)
		leucine-rich repeat	478..502	CDD:275380	5/23 (22%)
		leucine-rich repeat	503..526	CDD:275380	7/24 (29%)
		Ig	<714..761	CDD:472250
		Ig strand C	714..718	CDD:409358
		Ig strand E	734..738	CDD:409358
		Ig strand F	748..753	CDD:409358