Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001004432.1 | Gene: | LINGO4 / 339398 | HGNCID: | 31814 | Length: | 593 | Species: | Homo sapiens |
Alignment Length: | 428 | Identity: | 129/428 - (30%) |
---|---|---|---|
Similarity: | 187/428 - (43%) | Gaps: | 44/428 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 LVLATLPVALGLANCPNGCECDDDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDSSM-Q 92
Fly 93 FYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAE 157
Fly 158 LEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELY 222
Fly 223 LGTNSFMTIPGGAFQDLKGLTRLDLR-GAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQR 286
Fly 287 LGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLN 351
Fly 352 ELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWAD-LQTLDLSENPFECDCRLLWLRHLLVSRNA 415
Fly 416 SGQYAPVICAYP-----TALRD----LPLAHL-AEPLL 443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 4/21 (19%) |
LRR_8 | 96..155 | CDD:290566 | 20/58 (34%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 143..201 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 147..397 | CDD:238064 | 73/251 (29%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 10/23 (43%) | ||
LRR_8 | 217..276 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 265..321 | CDD:290566 | 16/55 (29%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 312..374 | CDD:290566 | 12/61 (20%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 8/20 (40%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 1/23 (4%) | ||
LRRCT | 395..445 | CDD:214507 | 22/59 (37%) | ||
LINGO4 | NP_001004432.1 | LRRNT | 31..64 | CDD:214470 | 10/32 (31%) |
leucine-rich repeat | 62..85 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 65..120 | CDD:290566 | 16/54 (30%) | ||
leucine-rich repeat | 86..109 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | 87..320 | CDD:238064 | 71/235 (30%) | ||
LRR_8 | 109..168 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 110..133 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 134..157 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 157..212 | CDD:290566 | 20/55 (36%) | ||
leucine-rich repeat | 158..181 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 182..205 | CDD:275380 | 10/23 (43%) | ||
leucine-rich repeat | 206..229 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 230..277 | CDD:275380 | 12/47 (26%) | ||
LRR_8 | 253..309 | CDD:290566 | 16/55 (29%) | ||
leucine-rich repeat | 278..301 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 301..360 | CDD:290566 | 23/84 (27%) | ||
leucine-rich repeat | 302..325 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 326..344 | CDD:275380 | 5/42 (12%) | ||
leucine-rich repeat | 350..362 | CDD:275378 | 7/11 (64%) | ||
IG_like | 420..501 | CDD:214653 | |||
Ig | 431..501 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1280 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |