DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment caps and lron-2

DIOPT Version :9

Sequence 1:NP_001303391.1 Gene:caps / 39493 FlyBaseID:FBgn0023095 Length:811 Species:Drosophila melanogaster
Sequence 2:NP_505402.1 Gene:lron-2 / 179309 WormBaseID:WBGene00022789 Length:575 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capsNP_001303391.1 leucine-rich repeat 75..96 CDD:275380
LRR_8 96..155 CDD:290566
leucine-rich repeat 97..120 CDD:275380
leucine-rich repeat 121..144 CDD:275380
LRR_8 143..201 CDD:290566
leucine-rich repeat 145..168 CDD:275380
LRR_RI 147..397 CDD:238064
leucine-rich repeat 169..192 CDD:275380
leucine-rich repeat 193..217 CDD:275380
LRR_8 217..276 CDD:290566
leucine-rich repeat 218..241 CDD:275380
leucine-rich repeat 242..265 CDD:275380
LRR_8 265..321 CDD:290566
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..313 CDD:275380
LRR_8 312..374 CDD:290566
leucine-rich repeat 314..335 CDD:275380
leucine-rich repeat 339..363 CDD:275380
LRRCT 395..445 CDD:214507
lron-2NP_505402.1 leucine-rich repeat 64..84 CDD:275380
leucine-rich repeat 85..109 CDD:275380
LRR_8 86..144 CDD:290566
LRR_RI 109..294 CDD:238064
leucine-rich repeat 110..133 CDD:275380
LRR_8 132..198 CDD:290566
leucine-rich repeat 134..157 CDD:275380
leucine-rich repeat 161..187 CDD:275380
leucine-rich repeat 188..211 CDD:275380
LRR_8 212..270 CDD:290566
leucine-rich repeat 213..235 CDD:275380
leucine-rich repeat 236..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
LRR_8 282..342 CDD:290566
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..355 CDD:275380
LRR_8 330..390 CDD:290566
leucine-rich repeat 356..377 CDD:275380
leucine-rich repeat 380..400 CDD:275380
Ca_hom_mod <481..>504 CDD:291464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D187891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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