Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258637.1 | Gene: | Lrrn3 / 16981 | MGIID: | 106036 | Length: | 707 | Species: | Mus musculus |
Alignment Length: | 395 | Identity: | 113/395 - (28%) |
---|---|---|---|
Similarity: | 176/395 - (44%) | Gaps: | 49/395 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 VALGLA------------NCPNGCECD-----------DDTLMVNCGEGTLDVLPIALNPAIQRL 77
Fly 78 VIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGL 142
Fly 143 STISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVP 207
Fly 208 GELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLS 272
Fly 273 DNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNT 337
Fly 338 NLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLV-PWADLQTLDLSENPFECDC 401
Fly 402 RLLWL 406 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 6/20 (30%) |
LRR_8 | 96..155 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 143..201 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 0/22 (0%) | ||
LRR_RI | 147..397 | CDD:238064 | 73/250 (29%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 217..276 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 265..321 | CDD:290566 | 17/55 (31%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 312..374 | CDD:290566 | 14/61 (23%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 5/23 (22%) | ||
LRRCT | 395..445 | CDD:214507 | 6/12 (50%) | ||
Lrrn3 | NP_001258637.1 | LRRNT | 28..72 | CDD:214470 | 9/43 (21%) |
LRR 1 | 70..91 | 5/20 (25%) | |||
leucine-rich repeat | 72..93 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 93..152 | CDD:290566 | 19/82 (23%) | ||
LRR 2 | 93..114 | 7/20 (35%) | |||
leucine-rich repeat | 94..117 | CDD:275380 | 7/22 (32%) | ||
LRR 3 | 117..138 | 5/20 (25%) | |||
leucine-rich repeat | 118..141 | CDD:275380 | 8/46 (17%) | ||
LRR | 139..160 | CDD:197688 | 9/44 (20%) | ||
LRR 4 | 141..162 | 8/20 (40%) | |||
leucine-rich repeat | 142..165 | CDD:275380 | 10/22 (45%) | ||
LRR 5 | 165..186 | 7/21 (33%) | |||
leucine-rich repeat | 166..189 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 173..221 | CDD:290566 | 16/48 (33%) | ||
LRR 6 | 189..210 | 7/20 (35%) | |||
leucine-rich repeat | 190..213 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 213..272 | CDD:290566 | 21/58 (36%) | ||
LRR 7 | 213..234 | 8/20 (40%) | |||
leucine-rich repeat | 214..237 | CDD:275380 | 10/22 (45%) | ||
LRR 8 | 237..258 | 7/20 (35%) | |||
leucine-rich repeat | 238..261 | CDD:275380 | 8/22 (36%) | ||
LRR 9 | 261..282 | 6/20 (30%) | |||
leucine-rich repeat | 262..285 | CDD:275380 | 7/22 (32%) | ||
LRR 10 | 285..304 | 4/18 (22%) | |||
leucine-rich repeat | 286..310 | CDD:275380 | 5/23 (22%) | ||
LRR 11 | 310..332 | 4/21 (19%) | |||
LRR_8 | 311..370 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 311..333 | CDD:275380 | 4/21 (19%) | ||
LRR 12 | 335..358 | 7/22 (32%) | |||
leucine-rich repeat | 336..359 | CDD:275380 | 7/22 (32%) | ||
LRRCT | 368..419 | CDD:214507 | 6/12 (50%) | ||
I-set | 429..513 | CDD:254352 | |||
Ig | 440..513 | CDD:299845 | |||
fn3 | 526..593 | CDD:278470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 159 | 1.000 | Inparanoid score | I4234 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8753 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103993 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.860 |