DRSC/TRiP Functional Genomics Resources

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Protein Alignment caps and CPN2

DIOPT Version :10

Sequence 1:NP_001303391.1 Gene:caps / 39493 FlyBaseID:FBgn0023095 Length:811 Species:Drosophila melanogaster
Sequence 2:NP_001073982.3 Gene:CPN2 / 1370 HGNCID:2313 Length:545 Species:Homo sapiens


Alignment Length:457 Identity:121/457 - (26%)
Similarity:182/457 - (39%) Gaps:87/457 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 CPNGCEC--------DDD--------------TLMVNCGEGTLDVLPIALNPAIQRLVIKNNKL- 84
            ||.||:|        |::              .:.|.....||:......||.:.::|..|.:| 
Human    22 CPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTKVVFLNTQLC 86

  Fly    85 ---------------------KTIDSSMQFYAQLTF---LDLSFNDMLTIPERSFAYHAKLQELH 125
                                 ..::.|...::.||.   |.|:||.:..:||..|.:.|.|:.||
Human    87 QFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLH 151

  Fly   126 LDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGL 190
            |..|::..:..:.|..|:.:..|||..||:|:|....|.|:..|..|.|..|.:|.:.......|
Human   152 LQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKL 216

  Fly   191 DNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNI 255
            .:|:.|:||.|.::.:|.:: |..|..|..|:|..|:...:|...|..|..||            
Human   217 GSLQELFLDSNNISELPPQV-FSQLFCLERLWLQRNAITHLPLSIFASLGNLT------------ 268

  Fly   256 SGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELT 320
                        ||.|..|.|..:|...|.....|..|::..|..|.::.|.|:.|..||.|.|:
Human   269 ------------FLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLS 321

  Fly   321 GAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPW- 384
             ...:..:.:|.|.....|..|.|.|| .|..|.......|..|..:.|..|||::|.||:... 
Human   322 -YNAITHLPAGIFRDLEELVKLYLGSN-NLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTN 384

  Fly   385 ADLQTLDLSENPFECDCRLLWLRHLLVSRNASGQYA------PVICAYPTALRDLPLAHLAEPLL 443
            .:|..|.|..||::|||.|.:|.:.|      .||.      ...||.|..|:...:..|.|..|
Human   385 YNLFNLALHGNPWQCDCHLAYLFNWL------QQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQL 443

  Fly   444 GC 445
            .|
Human   444 VC 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capsNP_001303391.1 leucine-rich repeat 75..96 CDD:275380 4/42 (10%)
LRR_8 96..155 CDD:404697 21/61 (34%)
leucine-rich repeat 97..120 CDD:275380 9/25 (36%)
leucine-rich repeat 121..144 CDD:275380 7/22 (32%)
LRR 135..>398 CDD:443914 75/263 (29%)
leucine-rich repeat 145..168 CDD:275380 9/22 (41%)
leucine-rich repeat 169..192 CDD:275380 6/22 (27%)
leucine-rich repeat 193..217 CDD:275380 8/23 (35%)
leucine-rich repeat 218..241 CDD:275380 7/22 (32%)
leucine-rich repeat 242..265 CDD:275380 2/22 (9%)
leucine-rich repeat 266..289 CDD:275380 7/22 (32%)
leucine-rich repeat 290..313 CDD:275380 7/22 (32%)
leucine-rich repeat 314..335 CDD:275380 6/20 (30%)
leucine-rich repeat 339..363 CDD:275380 8/23 (35%)
LRRCT 395..445 CDD:214507 17/55 (31%)
CPN2NP_001073982.3 LRRNT 21..53 CDD:214470 6/30 (20%)
leucine-rich repeat 30..53 CDD:275380 1/22 (5%)
leucine-rich repeat 75..98 CDD:275380 3/22 (14%)
LRR 95..419 CDD:443914 99/356 (28%)
LRR 1 98..119 1/20 (5%)
leucine-rich repeat 99..122 CDD:275380 2/22 (9%)
LRR 2 122..143 7/20 (35%)
leucine-rich repeat 123..146 CDD:275380 7/22 (32%)
LRR 3 146..167 6/20 (30%)
leucine-rich repeat 147..170 CDD:275380 7/22 (32%)
LRR 4 170..191 8/20 (40%)
leucine-rich repeat 171..194 CDD:275380 9/22 (41%)
LRR 5 194..215 5/20 (25%)
leucine-rich repeat 195..218 CDD:275380 6/22 (27%)
LRR 6 218..239 7/21 (33%)
leucine-rich repeat 219..242 CDD:275380 8/23 (35%)
LRR 7 242..263 6/20 (30%)
leucine-rich repeat 243..266 CDD:275380 7/22 (32%)
LRR 8 266..287 9/44 (20%)
leucine-rich repeat 267..290 CDD:275380 9/46 (20%)
LRR 9 290..311 6/20 (30%)
leucine-rich repeat 291..314 CDD:275380 7/22 (32%)
LRR 10 314..335 6/21 (29%)
leucine-rich repeat 315..338 CDD:275380 6/23 (26%)
LRR 11 338..359 7/21 (33%)
leucine-rich repeat 339..359 CDD:275380 7/20 (35%)
LRR 12 362..383 8/20 (40%)
leucine-rich repeat 363..382 CDD:275380 8/18 (44%)
leucine-rich repeat 387..399 CDD:275378 5/11 (45%)
LRRCT 395..446 CDD:214507 18/57 (32%)

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