Protein Alignment caps and lrrn3b

DIOPT Version :10

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: XP_009298331.1
• Gene: lrrn3b / 100535105
• ZFINID: ZDB-GENE-170217-3
• Length: 706
• Species: Danio rerio
• Alignment Length: 398
• Identity: 105/398 - (26%)
• Similarity: 174/398 - (43%)
• Gaps: 44/398 - (11%)

  Fly    25 LCLCLVLATLPVAL-GLANCPNGCECD-----------DDTLMVNCGEGTLDVLPIALNPAIQRL 77
            |.:.|.:||..:|. ...:||..|.|:           .:...::|.:..|..||..|....|.|
Zfish    10 LLVGLAMATFVIAAEEKISCPKLCVCEIRPWFSPSSVYMEAPTIDCNDLGLFKLPTRLPLDTQVL 74

  Fly    78 VIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGL 142
            :::.|.:...:..:.:...:|.:|||.|::.:|.:.:.....:|..||::.
Zfish    75 LLQTNNIAKNEHPLDYLTNITEIDLSQNNLSSINDINIGSLPQLLSLHMEE-------------- 125

  Fly   143 STISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVP 207
                      |.|..|...:.|.:..|.||.|..|.||.|.|.|..||.:|..|:|:.|.|..:.
Zfish   126 ----------NWICSLPDNSLSQLTNLQELYLNHNLISLISPEAFRGLQSLLRLHLNSNRLQIIK 180

  Fly   208 GELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLS 272
            .| .|:.|.:|..|.:|.|..::|....|:.|:.|..|.|....|..|..|:..||.:|..:...
Zfish   181 SE-WFEPLPNLEILMIGENPVLSIQDMNFKPLRNLRSLVLTRMNLSQIPDDSFLGLDNLESISFY 244

  Fly   273 DNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNT 337
            ||..|.:|..|.:.|..|:.|::.:|....|..|.|..:..|:.|.:.....|..::|.|.:...
Zfish   245 DNTFPKVPHGALRHLKSLKFLDLNKNPIGRIQRGDFVDMLHLKELGINSMPELVSIDSFALNNLP 309

  Fly   338 NLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLD----EGLVPWADLQTLDLSENPFE 398
            .|..:..::|.:|:.:...|...||.|.|::|..|.||:|.    |.|   .:|:.:.:..||..
Zfish   310 ELTKIEATNNPKLSYIHPNAFYRLPRLETLMLNGNALSALHRITVESL---PNLREVSMHSNPIR 371

  Fly   399 CDCRLLWL 406
            |||.:.|:
Zfish   372 CDCVVRWM 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	3/20 (15%)
		LRR_8	96..155	CDD:404697	10/58 (17%)
		leucine-rich repeat	97..120	CDD:275380	6/22 (27%)
		leucine-rich repeat	121..144	CDD:275380	3/22 (14%)
		LRR	135..>398	CDD:443914	75/266 (28%)
		leucine-rich repeat	145..168	CDD:275380	4/22 (18%)
		leucine-rich repeat	169..192	CDD:275380	12/22 (55%)
		leucine-rich repeat	193..217	CDD:275380	8/23 (35%)
		leucine-rich repeat	218..241	CDD:275380	7/22 (32%)
		leucine-rich repeat	242..265	CDD:275380	8/22 (36%)
		leucine-rich repeat	266..289	CDD:275380	7/22 (32%)
		leucine-rich repeat	290..313	CDD:275380	6/22 (27%)
		leucine-rich repeat	314..335	CDD:275380	5/20 (25%)
		leucine-rich repeat	339..363	CDD:275380	5/23 (22%)
		LRRCT	395..445	CDD:214507	6/12 (50%)
lrrn3b	XP_009298331.1	leucine-rich repeat	52..70	CDD:275380	5/17 (29%)
		leucine-rich repeat	71..93	CDD:275380	3/21 (14%)
		LRR	<72..325	CDD:443914	72/277 (26%)
		leucine-rich repeat	95..117	CDD:275380	6/21 (29%)
		leucine-rich repeat	118..141	CDD:275380	7/46 (15%)
		leucine-rich repeat	142..165	CDD:275380	12/22 (55%)
		leucine-rich repeat	166..189	CDD:275380	8/23 (35%)
		leucine-rich repeat	190..213	CDD:275380	7/22 (32%)
		leucine-rich repeat	214..237	CDD:275380	8/22 (36%)
		leucine-rich repeat	238..261	CDD:275380	7/22 (32%)
		leucine-rich repeat	262..285	CDD:275380	6/22 (27%)
		leucine-rich repeat	286..310	CDD:275380	5/23 (22%)
		LRR_8	309..370	CDD:404697	17/63 (27%)
		leucine-rich repeat	311..333	CDD:275380	4/21 (19%)
		leucine-rich repeat	336..357	CDD:275380	8/20 (40%)
		leucine-rich repeat	360..372	CDD:275378	3/11 (27%)
		LRRCT	368..411	CDD:214507	6/12 (50%)
		Ig	421..513	CDD:472250
		Ig strand B	440..444	CDD:409353
		Ig strand C	453..457	CDD:409353
		Ig strand E	479..483	CDD:409353
		Ig strand F	493..498	CDD:409353
		Ig strand G	506..509	CDD:409353
		fn3	518..593	CDD:394996