| Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002939414.1 | Gene: | lrrc4 / 100493671 | XenbaseID: | XB-GENE-968937 | Length: | 641 | Species: | Xenopus tropicalis |
| Alignment Length: | 334 | Identity: | 108/334 - (32%) |
|---|---|---|---|
| Similarity: | 151/334 - (45%) | Gaps: | 63/334 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 148 LNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTF 212
Fly 213 QALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAG----LHNISGDALKGLVSLRFLDLSD 273
Fly 274 NRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTN 338
Fly 339 LEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSENPFECDCRL 403
Fly 404 LWLRHLL---VSRNAS------------GQYAPVI------CAYP---TALRDLPLA--HLAEPL 442
Fly 443 LGCAHGAAS 451 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | |
| LRR_8 | 96..155 | CDD:290566 | 4/6 (67%) | ||
| leucine-rich repeat | 97..120 | CDD:275380 | |||
| leucine-rich repeat | 121..144 | CDD:275380 | |||
| LRR_8 | 143..201 | CDD:290566 | 20/52 (38%) | ||
| leucine-rich repeat | 145..168 | CDD:275380 | 7/19 (37%) | ||
| LRR_RI | 147..397 | CDD:238064 | 85/252 (34%) | ||
| leucine-rich repeat | 169..192 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 193..217 | CDD:275380 | 10/23 (43%) | ||
| LRR_8 | 217..276 | CDD:290566 | 24/62 (39%) | ||
| leucine-rich repeat | 218..241 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 12/26 (46%) | ||
| LRR_8 | 265..321 | CDD:290566 | 19/55 (35%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 11/22 (50%) | ||
| LRR_8 | 312..374 | CDD:290566 | 16/61 (26%) | ||
| leucine-rich repeat | 314..335 | CDD:275380 | 6/20 (30%) | ||
| leucine-rich repeat | 339..363 | CDD:275380 | 6/23 (26%) | ||
| LRRCT | 395..445 | CDD:214507 | 21/75 (28%) | ||
| lrrc4 | XP_002939414.1 | LRRNT | 40..71 | CDD:214470 | |
| LRR | <68..285 | CDD:227223 | 81/241 (34%) | ||
| leucine-rich repeat | 71..94 | CDD:275380 | 7/19 (37%) | ||
| leucine-rich repeat | 95..118 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 119..142 | CDD:275380 | 10/23 (43%) | ||
| leucine-rich repeat | 143..166 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 167..191 | CDD:275380 | 12/26 (46%) | ||
| leucine-rich repeat | 192..213 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 214..237 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 238..261 | CDD:275380 | 6/23 (26%) | ||
| leucine-rich repeat | 262..283 | CDD:275380 | 8/44 (18%) | ||
| LRRCT | 294..345 | CDD:214507 | 12/50 (24%) | ||
| IG_like | 353..435 | CDD:214653 | 9/24 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 1 | 1.000 | - | - | mtm9420 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||