| Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002938357.1 | Gene: | lrrn1 / 100492182 | XenbaseID: | XB-GENE-18030784 | Length: | 718 | Species: | Xenopus tropicalis |
| Alignment Length: | 553 | Identity: | 140/553 - (25%) |
|---|---|---|---|
| Similarity: | 231/553 - (41%) | Gaps: | 102/553 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 29 LVLATLPVALGL-----------AN-CPNGCECD-----------DDTLMVNCGEGTLDVLPIAL 70
Fly 71 NPAIQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVS 135
Fly 136 NKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDD 200
Fly 201 NTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVS 265
Fly 266 LRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVES 330
Fly 331 GAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLV-PWADLQTLDLSE 394
Fly 395 NPFECDCRLLWLRHLLVSRNASGQY---APVICAYPTALRDLPLAHLAEPLLGCAHGAASKQAI- 455
Fly 456 --------------IGILV-VACAALITTLALVLYTCRHRIREMLKGHSALGRKEREYQKTFSDE 505
Fly 506 EYMSRPPPGGGGVH------PAAGGYPYIAGNS 532 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 4/20 (20%) |
| LRR_8 | 96..155 | CDD:404697 | 14/58 (24%) | ||
| leucine-rich repeat | 97..120 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 121..144 | CDD:275380 | 6/22 (27%) | ||
| LRR | 135..>398 | CDD:443914 | 71/263 (27%) | ||
| leucine-rich repeat | 145..168 | CDD:275380 | 1/22 (5%) | ||
| leucine-rich repeat | 169..192 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 193..217 | CDD:275380 | 6/23 (26%) | ||
| leucine-rich repeat | 218..241 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 314..335 | CDD:275380 | 5/20 (25%) | ||
| leucine-rich repeat | 339..363 | CDD:275380 | 5/23 (22%) | ||
| LRRCT | 395..445 | CDD:214507 | 14/52 (27%) | ||
| lrrn1 | XP_002938357.1 | LRRNT | 33..76 | CDD:214470 | 9/42 (21%) |
| leucine-rich repeat | 75..97 | CDD:275378 | 4/21 (19%) | ||
| LRR | <76..>323 | CDD:443914 | 75/271 (28%) | ||
| leucine-rich repeat | 98..121 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 122..145 | CDD:275380 | 7/46 (15%) | ||
| leucine-rich repeat | 146..169 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 170..193 | CDD:275380 | 6/23 (26%) | ||
| leucine-rich repeat | 194..217 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 218..241 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 290..314 | CDD:275380 | 5/23 (22%) | ||
| LRR_8 | 313..374 | CDD:404697 | 15/60 (25%) | ||
| leucine-rich repeat | 315..336 | CDD:275380 | 5/20 (25%) | ||
| leucine-rich repeat | 340..363 | CDD:275378 | 7/22 (32%) | ||
| leucine-rich repeat | 364..376 | CDD:275378 | 3/11 (27%) | ||
| LRRCT | 372..418 | CDD:214507 | 15/55 (27%) | ||
| I-set | 431..518 | CDD:400151 | 19/94 (20%) | ||
| Ig strand B | 445..449 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 458..467 | CDD:409353 | 1/20 (5%) | ||
| Ig strand E | 484..488 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 498..503 | CDD:409353 | 1/4 (25%) | ||
| FN3 | 538..602 | CDD:473895 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||