Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031758515.1 | Gene: | lrfn2 / 100491687 | XenbaseID: | XB-GENE-6035533 | Length: | 765 | Species: | Xenopus tropicalis |
Alignment Length: | 720 | Identity: | 151/720 - (20%) |
---|---|---|---|
Similarity: | 247/720 - (34%) | Gaps: | 261/720 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 148 LNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTF 212
Fly 213 QALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLP 277
Fly 278 AIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHL 342
Fly 343 NLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSENPFECDCRLLWLR 407
Fly 408 HLLVSRNASGQYAPVICAYPTALRDLPLAHLAEPLLGCAHGAASKQAIIGILVVACAALITTLAL 472
Fly 473 VLYTCRHRIREMLKGHSA-----------------------LGRKERE--YQKTFSD------EE 506
Fly 507 YMSRPPPGGGGVHPAAGGYPYIAGNSRMIPVTELXLEAPPPPQLRGRGGGGGASTASGAVQQLQV 571
Fly 572 P---SAVDQASNSFAQLSHIHYMT--NNGQQQQAQQQ--------QSTS-------------KMH 610
Fly 611 HSQQDMRLLACNGGKPLNATSLPRHRPPVVQESTLSHYSQPL--------------ANGI----- 656
Fly 657 RLTQDHFNHNQNQSHNQHYGG----------------------VYAKPCD----AMSEPGYIHNN 695
Fly 696 SHYSLPLDHDLPPSPTPTPPPPALPLRNGV-----GMALIHGNTTGRRS---------FNNNNNV 746
Fly 747 STLSN 751 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | |
LRR_8 | 96..155 | CDD:290566 | 4/6 (67%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | |||
leucine-rich repeat | 121..144 | CDD:275380 | |||
LRR_8 | 143..201 | CDD:290566 | 21/52 (40%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 7/19 (37%) | ||
LRR_RI | 147..397 | CDD:238064 | 65/248 (26%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 11/23 (48%) | ||
LRR_8 | 217..276 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 1/22 (5%) | ||
LRR_8 | 265..321 | CDD:290566 | 21/55 (38%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 312..374 | CDD:290566 | 10/61 (16%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 6/20 (30%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 4/23 (17%) | ||
LRRCT | 395..445 | CDD:214507 | 17/49 (35%) | ||
lrfn2 | XP_031758515.1 | LRR_8 | 51..111 | CDD:404697 | 22/54 (41%) |
leucine-rich repeat | 53..76 | CDD:275380 | 7/19 (37%) | ||
leucine-rich repeat | 77..100 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 100..160 | CDD:404697 | 26/83 (31%) | ||
leucine-rich repeat | 101..124 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 125..148 | CDD:275380 | 8/45 (18%) | ||
LRR_8 | 148..208 | CDD:404697 | 22/60 (37%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 174..197 | CDD:275380 | 8/22 (36%) | ||
LRRCT | 241..285 | CDD:214507 | 17/49 (35%) | ||
Ig | 288..375 | CDD:416386 | 21/133 (16%) | ||
Ig strand A | 288..291 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 295..298 | CDD:409353 | 1/2 (50%) | ||
Ig strand B | 304..312 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 318..323 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 326..328 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 334..338 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 341..345 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 355..362 | CDD:409353 | 2/6 (33%) | ||
Ig strand G | 365..375 | CDD:409353 | 3/9 (33%) | ||
fn3 | 417..485 | CDD:394996 | 11/72 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |