Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002940407.1 | Gene: | lrfn1.1 / 100487064 | XenbaseID: | XB-GENE-6045969 | Length: | 742 | Species: | Xenopus tropicalis |
Alignment Length: | 677 | Identity: | 143/677 - (21%) |
---|---|---|---|
Similarity: | 213/677 - (31%) | Gaps: | 255/677 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 LCLCLVLATLPVALGLANCPNGCECDDD--TLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTI 87
Fly 88 DSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRG 152
Fly 153 NLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHS 217
Fly 218 LAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTA 282
Fly 283 AFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSN 347
Fly 348 KQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSENPFECDCRLLWLRHLLVS 412
Fly 413 RNASGQYAPVICAYPTALRDLPLAHLAEPLLGCAHGAASKQAIIGILVVACAALITTLALVLYTC 477
Fly 478 RHRIRE--MLKGHS------ALGRKEREYQKTFSDEEYMSRPPPGGGGVHPAAGGYPYIAGNSRM 534
Fly 535 ---------IPVTELXLEAPPPPQLRGRGGGGGASTASGAVQQLQVPSAVDQASNSFAQLSHIHY 590
Fly 591 MTNNGQQQQAQQQQST------------SKMHHSQQDMRLLACNGGKPLNATSLPRHRPPVVQES 643
Fly 644 TLSHYSQPLANGIRLTQDHFNHNQNQS 670 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 2/20 (10%) |
LRR_8 | 96..155 | CDD:290566 | 3/58 (5%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 143..201 | CDD:290566 | 19/57 (33%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 147..397 | CDD:238064 | 61/249 (24%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 217..276 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 1/22 (5%) | ||
LRR_8 | 265..321 | CDD:290566 | 16/55 (29%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 312..374 | CDD:290566 | 12/61 (20%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 7/23 (30%) | ||
LRRCT | 395..445 | CDD:214507 | 16/49 (33%) | ||
lrfn1.1 | XP_002940407.1 | leucine-rich repeat | 55..78 | CDD:275380 | 7/81 (9%) |
PPP1R42 | 58..208 | CDD:411060 | 51/173 (29%) | ||
leucine-rich repeat | 79..102 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 103..126 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 127..151 | CDD:275380 | 10/46 (22%) | ||
leucine-rich repeat | 152..175 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 176..199 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 200..218 | CDD:275380 | 4/17 (24%) | ||
LRRCT | 243..288 | CDD:214507 | 16/50 (32%) | ||
Ig | 290..378 | CDD:416386 | 25/136 (18%) | ||
Ig strand A | 290..293 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 298..301 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 307..315 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 321..326 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 329..331 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 337..341 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 344..348 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 358..365 | CDD:409353 | 1/6 (17%) | ||
Ig strand G | 368..378 | CDD:409353 | 3/17 (18%) | ||
fn3 | 418..492 | CDD:394996 | 13/55 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |