Protein Alignment caps and lrrc32

DIOPT Version :9

• Sequence 1: NP_001303391.1
• Gene: caps / 39493
• FlyBaseID: FBgn0023095
• Length: 811
• Species: Drosophila melanogaster
• Sequence 2: XP_001920576.2
• Gene: lrrc32 / 100148867
• ZFINID: ZDB-GENE-090630-1
• Length: 659
• Species: Danio rerio
• Alignment Length: 658
• Identity: 158/658 - (24%)
• Similarity: 235/658 - (35%)
• Gaps: 228/658 - (34%)

  Fly    22 CLCLCLCLVLATLPVALGLANCPNGCECDDDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKT 86
            |..|.|..|.|.||.::.|.:.       ...|:.|.   ||..||  ...:::||.:.:|:::.
Zfish    36 CSSLSLRRVPAPLPSSIRLLDL-------SQNLLQNL---TLQDLP--SRSSLRRLDLHHNQIQF 88

  Fly    87 ID-----------------SSMQFYA----------QLTFLDLSFNDMLTIPERSFAYHA-KLQE 123
            :.                 :::..||          .|..||||.|.:.|.....|...| .|..
Zfish    89 LQPGLFRDLLHLEDLDLSGNALDLYAALHTPLGPLPALRRLDLSGNGLFTDMSDYFLSDAPALTN 153

  Fly   124 LHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHI------ 182
            |.||.|.|.::|..||.|...:..::|..|:|.|:|...|..:.:|:||:|..|.||.|
Zfish   154 LSLDGNSITKISRTTFNGSQALQNIDLHNNVIIEIEEGAFEFLTELSELDLSVNSISCITDFNLV 218

  Fly   183 ---------------------DPHALDGLD--------------NLRVLYLD--DNTLTTVPGEL 210
                                 |...|..||              ..|::|||  .|.|.:|....
Zfish   219 QLRTLNLSRNSLTNFQSLDMEDEFQLQHLDLRENKLLYFPVLPQRNRLMYLDLSRNLLRSVNCSG 283

  Fly   211 TFQALHSLAE--------------------------LY--LGTNSFMTIPGGAFQDLKGLTRLDL 247
            ..:.|.||.|                          ||  |..|...|:....|..:..|..|::
Zfish   284 PLEELESLRESGYLLTAHDKPLTLCANERQQELGRLLYLDLSFNQLKTLSSSFFSSMAALESLNI 348

  Fly   248 RGAGLHNISGDALKGLVSLRFLDLSDNR----------LPAIPTA-------------AFQRLGR 289
            ....|.:.|.|:|:   ||:.||||.|.          |||:...             .|..|..
Zfish   349 SNNCLQSFSVDSLR---SLKTLDLSFNNLQNLSFSGGALPALEVLLLQGNALHLLDAHIFSSLPS 410

  Fly   290 LEQLNIGQNDFEV-----ISSGA--FSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSN 347
            :..|::.||...:     ||||.  .|.:..|.:|.|: ...|..:..|||.|:. |..|:||.|
Zfish   411 IRSLHLQQNLLSICADPQISSGCVHLSDIPSLTYLYLS-ENSLSSIPDGAFKGSP-LLILDLSLN 473

  Fly   348 KQLNELSSIALGG----LPHLSTVVLKANQLSSLD-------------------EGLVPWAD--- 386
            ..: ::::.:|.|    |.|||   |:.|||.||.                   .|:.||::
Zfish   474 PGV-DITAASLSGVETSLTHLS---LRGNQLHSLSIDFRVFQKLRSLDVSVNRLSGVSPWSEDSS 534

  Fly   387 ----------------------LQTLDLSENPFECDCRLLWLRHLLVSRNA------------SG 417
                                  |:||.:..||..| ||...|..||.....            ||
Zfish   535 VEILNLQNNRVEALGSALLQGRLRTLYVGWNPLSC-CRNPQLLDLLQQERLHVPDLAAATCWYSG 598

  Fly   418 QYAPVICAYPTALRDLPLAHLAEPLLGCAHGAASKQAIIGILVVACA---ALITTLALVL-YTCR 478
            ....|..:...||.:|           |:  :|..:.:...|:||.|   ||:.|::|.| ::.:
Zfish   599 DVEQVEVSVSAALPEL-----------CS--SADSRVLWVSLMVALALGLALVLTVSLKLCHSRK 650

  Fly   479 HRIREMLK 486
            ||.:...|
Zfish   651 HRFKRGFK 658

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caps	NP_001303391.1	leucine-rich repeat	75..96	CDD:275380	5/47 (11%)
		LRR_8	96..155	CDD:290566	21/59 (36%)
		leucine-rich repeat	97..120	CDD:275380	9/23 (39%)
		leucine-rich repeat	121..144	CDD:275380	10/22 (45%)
		LRR_8	143..201	CDD:290566	22/100 (22%)
		leucine-rich repeat	145..168	CDD:275380	6/22 (27%)
		LRR_RI	147..397	CDD:238064	93/398 (23%)
		leucine-rich repeat	169..192	CDD:275380	12/63 (19%)
		leucine-rich repeat	193..217	CDD:275380	8/25 (32%)
		LRR_8	217..276	CDD:290566	22/96 (23%)
		leucine-rich repeat	218..241	CDD:275380	8/50 (16%)
		leucine-rich repeat	242..265	CDD:275380	6/22 (27%)
		LRR_8	265..321	CDD:290566	23/85 (27%)
		leucine-rich repeat	266..289	CDD:275380	11/45 (24%)
		leucine-rich repeat	290..313	CDD:275380	8/29 (28%)
		LRR_8	312..374	CDD:290566	21/65 (32%)
		leucine-rich repeat	314..335	CDD:275380	7/20 (35%)
		leucine-rich repeat	339..363	CDD:275380	8/27 (30%)
		LRRCT	395..445	CDD:214507	14/61 (23%)
lrrc32	XP_001920576.2	LRR_RI	33..276	CDD:238064	61/251 (24%)
		leucine-rich repeat	55..75	CDD:275380	6/31 (19%)
		leucine-rich repeat	76..125	CDD:275380	5/48 (10%)
		leucine-rich repeat	100..122	CDD:275380	2/21 (10%)
		leucine-rich repeat	126..150	CDD:275380	9/23 (39%)
		LRR_8	149..209	CDD:290566	21/59 (36%)
		leucine-rich repeat	151..174	CDD:275380	10/22 (45%)
		leucine-rich repeat	175..198	CDD:275380	6/22 (27%)
		LRR_RI	198..453	CDD:238064	58/258 (22%)
		leucine-rich repeat	199..219	CDD:275380	8/19 (42%)
		leucine-rich repeat	220..243	CDD:275380	1/22 (5%)
		leucine-rich repeat	266..318	CDD:275380	10/51 (20%)
		leucine-rich repeat	288..310	CDD:275380	4/21 (19%)
		LRR_8	318..374	CDD:290566	19/58 (33%)
		leucine-rich repeat	319..342	CDD:275380	6/22 (27%)
		leucine-rich repeat	343..363	CDD:275380	6/22 (27%)
		LRR_8	362..421	CDD:290566	15/61 (25%)
		leucine-rich repeat	387..410	CDD:275380	2/22 (9%)
		leucine-rich repeat	411..441	CDD:275380	8/29 (28%)
		leucine-rich repeat	442..463	CDD:275380	7/21 (33%)
		leucine-rich repeat	465..489	CDD:275380	7/24 (29%)
		leucine-rich repeat	490..512	CDD:275380	10/24 (42%)
		leucine-rich repeat	513..534	CDD:275380	3/20 (15%)
		leucine-rich repeat	535..555	CDD:275380	0/19 (0%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45617
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.100