DRSC/TRiP Functional Genomics Resources

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Protein Alignment caps and zgc:172282

DIOPT Version :9

Sequence 1:NP_001303391.1 Gene:caps / 39493 FlyBaseID:FBgn0023095 Length:811 Species:Drosophila melanogaster
Sequence 2:NP_001107121.1 Gene:zgc:172282 / 100003690 ZFINID:ZDB-GENE-080219-38 Length:687 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capsNP_001303391.1 leucine-rich repeat 75..96 CDD:275380
LRR_8 96..155 CDD:290566
leucine-rich repeat 97..120 CDD:275380
leucine-rich repeat 121..144 CDD:275380
LRR_8 143..201 CDD:290566
leucine-rich repeat 145..168 CDD:275380
LRR_RI 147..397 CDD:238064
leucine-rich repeat 169..192 CDD:275380
leucine-rich repeat 193..217 CDD:275380
LRR_8 217..276 CDD:290566
leucine-rich repeat 218..241 CDD:275380
leucine-rich repeat 242..265 CDD:275380
LRR_8 265..321 CDD:290566
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..313 CDD:275380
LRR_8 312..374 CDD:290566
leucine-rich repeat 314..335 CDD:275380
leucine-rich repeat 339..363 CDD:275380
LRRCT 395..445 CDD:214507
zgc:172282NP_001107121.1 LRR_8 51..111 CDD:290566
LRR 1 52..73
leucine-rich repeat 53..76 CDD:275380
LRR_RI <71..>208 CDD:238064
LRR 2 76..97
leucine-rich repeat 77..100 CDD:275380
LRR_8 99..160 CDD:290566
LRR_4 99..140 CDD:289563
LRR 3 100..121
leucine-rich repeat 101..124 CDD:275380
LRR 4 124..145
leucine-rich repeat 125..149 CDD:275380
LRR_8 149..208 CDD:290566
LRR 5 149..170
leucine-rich repeat 150..173 CDD:275380
LRR 6 173..194
leucine-rich repeat 174..197 CDD:275380
LRR 7 197..218
leucine-rich repeat 198..233 CDD:275380
LRRCT 241..286 CDD:214507
IG_like 299..375 CDD:214653
Ig 302..375 CDD:299845
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 384..412
fn3 419..491 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..601
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..687
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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