Sequence 1: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001373591.1 | Gene: | lrrtm4l1 / 100000724 | ZFINID: | ZDB-GENE-080327-15 | Length: | 571 | Species: | Danio rerio |
Alignment Length: | 534 | Identity: | 128/534 - (23%) |
---|---|---|---|
Similarity: | 205/534 - (38%) | Gaps: | 141/534 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 LCLCLVLATLPVALGLANCPNGCECDDDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDS 89
Fly 90 SMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNL 154
Fly 155 IAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTV-PGELTFQALHSL 218
Fly 219 AELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAA 283
Fly 284 FQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNK 348
Fly 349 QLNELSSIALGGLPHLSTVVLKANQLSSLDEGLV-PWADLQTLDLSENPFECD---CRL-LWLRH 408
Fly 409 LLVSRNASGQYAPVICAYPTALRDLPLAHLAEPLLGCAHGAASKQAIIGILVVACAALITTLALV 473
Fly 474 LYTCRHRIREMLKGHSALGRKEREYQKTFSDEEYMSRPPPGGGGVHPAAGGYPYIAGNSRMIPVT 538
Fly 539 ELXLEAP-PPPQLR 551 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 1/20 (5%) |
LRR_8 | 96..155 | CDD:290566 | 17/58 (29%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 143..201 | CDD:290566 | 14/57 (25%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 0/22 (0%) | ||
LRR_RI | 147..397 | CDD:238064 | 73/251 (29%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 10/24 (42%) | ||
LRR_8 | 217..276 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 265..321 | CDD:290566 | 24/55 (44%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 312..374 | CDD:290566 | 18/61 (30%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 8/20 (40%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 6/23 (26%) | ||
LRRCT | 395..445 | CDD:214507 | 10/53 (19%) | ||
lrrtm4l1 | NP_001373591.1 | leucine-rich repeat | 60..83 | CDD:275380 | 8/45 (18%) |
LRR_8 | 63..118 | CDD:404697 | 22/78 (28%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 10/46 (22%) | ||
LRR_8 | 106..166 | CDD:404697 | 24/85 (28%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 10/24 (42%) | ||
PPP1R42 | 153..308 | CDD:411060 | 53/180 (29%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 8/46 (17%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 204..227 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 228..251 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 6/23 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |