DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and dcst2

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001353270.1 Gene:dcst2 / 556296 ZFINID:ZDB-GENE-070809-6 Length:709 Species:Danio rerio


Alignment Length:756 Identity:180/756 - (23%)
Similarity:293/756 - (38%) Gaps:148/756 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PFLPIFCFLYGPQSEGSTRIQCLRRFVT-FLLGLVLGFLLWKLAALNFTLGRLFVNGATDLYV-- 69
            |..|:...|...:...|..::.::|.:| |.|||.|.                .|.|.|.||:  
Zfish     3 PQEPVLTSLRRKRLRRSLAVRQVKRSLTGFALGLFLA----------------SVYGVTALYIQH 51

  Fly    70 ----FIIFVLVTGTIFM-----LSLPVRAVILLIFVALVGKSGRTYLRAVAFAFIISGPIANLVE 125
                |.:.......:|:     ||..||..::|:|..|....|:..|.......:|.||::|.:|
Zfish    52 HDVWFCVISTAILAVFVGFGTGLSERVRTNVMLMFPVLCSMRGKNLLLFFICTLVIHGPVSNTME 116

  Fly   126 NAGEVARVFVCTTVLTYNLSKTRFDLMAKPF---TNTLKHMRGDV---------------EEIRH 172
            |....|...:|.|.||.|.::......|.|.   .|.:|.|..:.               |.:||
Zfish   117 NVERAADSVICGTELTMNQTQQLLQRAANPLLPALNKIKEMARNAYSMAGRAQNFIMALSESVRH 181

  Fly   173 TFYELQEVLVDLKYAVENSDIEDEKYGDKNTKPIYERWGR--ETSRMNVSEIGNGGKELPTPAAV 235
            ....|:.||..|      :||.| ...|....| ||:...  :.:|.|..|:          .:|
Zfish   182 VARTLRNVLHFL------ADIGD-ACNDNLGLP-YEKCTGLFDEARENCMEL----------LSV 228

  Fly   236 QERFQRNMRNRCKHQLRSGHRACLEVFRNGYRKCTTNFPSMIAKAICWPYRVDIICELDLFGNPD 300
            ...|       |  .|..|.::...:.|.|...|.  .||.||:.:........|...|..    
Zfish   229 FSFF-------C--HLLDGFQSLCGLARVGQLFCI--LPSYIAEHLKTTLAYPTIAAFDRI---- 278

  Fly   301 KICDPSAVVPQNFGETYVELLKAEKKLFDNSSQIVVNYEIKDEQFAKSQLKSAERTGQAFKEDFE 365
                                    ||.|:.:....:|:.:     ..:..:|.:...|...|:..
Zfish   279 ------------------------KKEFEFNISTSINFTL-----LMNSSQSMQDAAQQIMEEVS 314

  Fly   366 RQKRIFNKVMGILQKILCL------FMLRMVYVSINYYV-KYLNDVEFDNFYITKYFKHVDQRRK 423
            .:       :.:||::..|      |||..:||.:..|. |||::.||:|||||..|..:|::..
Zfish   315 EE-------LVLLQELKALLTYTGFFMLLFIYVQVVLYKNKYLHNDEFENFYITDQFIELDKKCS 372

  Fly   424 EQRIDAILPLRTYEKSKYIDVDHIFSRTHHESTTVCFNLLQFLLELVTAGLFILIDHLVVELLQI 488
            .|....:|||...|...||....:: .|..|...:...:|..|..:|...:.|.:|.:|..:.::
Zfish   373 RQGKATVLPLSHREALTYIRPYSLY-LTVRERRAIAGQMLSLLRFMVMTIVLIAVDLMVFWMFEL 436

  Fly   489 VR--KRSKIVYQQDGEHEVRFNISGVGQMARLLRTTMHNFNIHEKVSTSLSNKECL--PNAHVLP 549
            |.  .:.:||.|  ....|...::|.|..:.:.|....:|:|.:|.:.::.:|:||  |:.   |
Zfish   437 VHHLAQGEIVAQ--APVVVAVQVNGSGYASDIFRDIAASFDILQKGNITVISKKCLVKPSE---P 496

  Fly   550 KKMYYQLI-LLYLIIIVLIYQSTTFLRMRRVICSFFYYKREKQRILFLYNRILRNRLRSLEFLIH 613
            ..|.|.|| |||...:.::.......|::|.:|:.::.:|||:||.:|:..||..|....:.|:.
Zfish   497 DYMRYLLIGLLYGFTLFIVIAGGYIKRLKRFVCARYHPEREKKRIQYLHKHILTQRGSLGKALMK 561

  Fly   614 DAEDNLATHRIQQQVNVFLWLRFSCPVAFGWIRHFKFAKRTCMIC------RGLEDSTFTVC--G 670
            ..:.|...   |||..:...|....|......|.....|.:||.|      ||.:|... :|  .
Zfish   562 ALQRNKVD---QQQGGIMQALAKHLPGGSIIARLLDIGKESCMACGKVLETRGCDDEVH-ICPTP 622

  Fly   671 NCGLPYCDDCAEDLNSVCFQC-GVVLTRGAEGSESSVEVYT 710
            .|...||..|.:.:..:|..| |.:..:..:..:||.|..|
Zfish   623 RCTGRYCLLCFKLMGEICVFCTGALTVQEEQELDSSDEEQT 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 54/195 (28%)
dcst2NP_001353270.1 DC_STAMP 355..545 CDD:462265 54/195 (28%)

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