DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and dcst1

DIOPT Version :9

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_017206887.1 Gene:dcst1 / 556016 ZFINID:ZDB-GENE-070809-5 Length:593 Species:Danio rerio


Alignment Length:655 Identity:163/655 - (24%)
Similarity:289/655 - (44%) Gaps:92/655 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 MLSLPVRAVILLIFVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEVARVFVCTTVLTYNLSK 146
            |.|...|..:||:|.:::|..|||:|.......:..|||||:..|..:||....|...|....||
Zfish     1 MFSSLFRCSVLLMFPSMIGSHGRTFLMVFVLHGLYQGPIANIQHNVQDVASSMGCNIDLQITHSK 65

  Fly   147 TRFDLMAKPFTNTLKH--MRGDVEEIRHTFYELQEVLVDLKYAVENSDIEDE---KYGDKNTKPI 206
            ..:.::.:|:...::.  :..|.||.::   |.|.|      :::...:.||   :||       
Zfish    66 LMWRMLTEPYVEVVQEIVVNEDSEEFQN---EAQNV------SMQFQKVRDEVMGQYG------- 114

  Fly   207 YERWGRETSRMNVSEIGNGGKELPTPAAVQERFQRNMRNRCKHQLRSGHRACLEVFRNGYRKC-- 269
            :...|:|:              :.|..:.||.:....|.||.:.::.|...|.:.||..:.:|  
Zfish   115 FNSLGKES--------------VHTANSTQEEYVAKTRARCDYVVQQGITRCQDWFRVKWDECMN 165

  Fly   270 TTNFPSMIAKAICWPYRVDIICELDLFGNPDKICDPSAVVPQNFGETYVELLKAEKKLFDNSSQI 334
            |...| :|...||.|.:...:|::....||  .|.....|..|||:|:.:|..:..:|.::.:..
Zfish   166 TIQVP-LINHFICIPMQFHFLCDIMRVMNP--WCTEKIPVEGNFGQTFDKLNDSINRLAEHFTTN 227

  Fly   335 VVNYEIKDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMGILQKILCLFMLRMVYVSINYYVK 399
            :|..|:  ||.|...:...:...:....:|:.:..|..|:.|::..:|....:.:...:..|..:
Zfish   228 LVLEEL--EQQAVLGVNVLQDFSKELSREFQEKTAIAEKISGVINFLLSFTFITVFTSAFGYVRQ 290

  Fly   400 YLNDVEFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHESTTVCFNLLQ 464
            |..|:.|||.|||.||:.:|.||.......:|||:..|:...|:.   :..:.|.|..:  .::.
Zfish   291 YCRDILFDNVYITTYFRQIDARRIRAEKRHLLPLKKAERESLINP---WRLSIHASELM--PVIV 350

  Fly   465 FLLELVTAGLFI----LIDHLVVELLQIVRKRSKIVYQQDGEHEVRFNISGVGQMARLLRTTMHN 525
            ..|::.:..||:    .:|.::..:..::|:.:...|...........|.|...:|||||.|:..
Zfish   351 GFLQVASLALFVCVLLAVDGILYNIFDLIRRHTFTTYSITSVQHADIVIGGDSMLARLLRKTIGA 415

  Fly   526 FNIHEKVSTSLSNKECLPNAHVL----PKKMYYQLILLYLIIIVLIYQSTTFLRMRRVICSFFYY 586
            ||.........||.:|||..|.|    ..:::..|:|::|:.::.:|.:    |:||||.:|::.
Zfish   416 FNTSSNFDIESSNLDCLPQPHSLILSDYLRIFIPLLLMFLMCLLQVYSN----RLRRVITAFYFP 476

  Fly   587 KREKQRILFLYNRILRNRLRSLEFLIHDAEDNLATHRIQQQVNVFLWL---------RFSCPVAF 642
            ||||:|||||||..::.|:..:         |...||::.....|:.:         |..|.:. 
Zfish   477 KREKKRILFLYNLQIQKRISFI---------NRQCHRLRNPKQTFVMVLSGVLAPLKRVGCRLL- 531

  Fly   643 GWIRHFKFAKRTCMICRG-LEDSTFTVCGN--CGLPYCDDCAEDLNSVCFQCGVVLTRGAEGSES 704
             |          |.:|.| :..:....|.:  |.:.||..|..||:::|..|........:.|..
Zfish   532 -W----------CCVCEGFVRQNQAVECSSVGCTMIYCQQCWTDLDNICCICYPRNQCAPQDSSY 585

  Fly   705 SVEVY 709
            ..|||
Zfish   586 DSEVY 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:311636 59/198 (30%)
dcst1XP_017206887.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596642
Domainoid 1 1.000 99 1.000 Domainoid score I7071
eggNOG 1 0.900 - - E1_KOG3726
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H14981
Inparanoid 1 1.050 208 1.000 Inparanoid score I3671
OMA 1 1.010 - - QHG46332
OrthoDB 1 1.010 - - D261254at33208
OrthoFinder 1 1.000 - - FOG0007286
OrthoInspector 1 1.000 - - oto40816
orthoMCL 1 0.900 - - OOG6_109407
Panther 1 1.100 - - LDO PTHR21041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3469
SonicParanoid 1 1.000 - - X7225
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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