DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and ocstamp

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001014362.1 Gene:ocstamp / 541527 ZFINID:ZDB-GENE-050327-65 Length:473 Species:Danio rerio


Alignment Length:639 Identity:113/639 - (17%)
Similarity:198/639 - (30%) Gaps:227/639 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LPIFCFLY-GPQSEGSTRIQCLRRFVTFLLGLVLGFLL-WKLAALNFTLGRLFVNGATDLYVFII 72
            |.|....| .|..:.::.:..|......|:.:....|. |.:..|.:.:....:  |..:|...:
Zfish    20 LEILWLCYSSPTPQAASHLLTLLVLCLSLVAVTSSLLFYWLINLLRYNIQTALI--AVGIYATAV 82

  Fly    73 FVLVTGTIFMLSLPVRAVILLIFVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEVARVFVCT 137
            |:|..     |..|.|..:.|||..|..:.||..|.:.:...::...:.|:..|...:..|..|.
Zfish    83 FILSA-----LIHPFRCAVTLIFPTLFTQQGRKLLLSTSVMIVVLYVLPNMAANIATLTHVVKCA 142

  Fly   138 TVLTYNLSKTRFDLMAKPFTNTLKH--MRGDVEEIRHTFYELQEVLVDLKYAVENSDIEDEKYGD 200
               :..||::.  |.:....||:|.  :....|.:.|          :|.:.:.:.|        
Zfish   143 ---SEKLSQSL--LSSSELINTIKENMVTTAKENVNH----------NLVHKLSDFD-------- 184

  Fly   201 KNTKPIYERWGRETSRMNVSEIGNGGKELPTPAAVQERFQRNMRNRCKHQLRSGHRACLEVFRNG 265
                        .|:.:||||:                         |.:|.|            
Zfish   185 ------------HTTNINVSEV-------------------------KGRLHS------------ 200

  Fly   266 YRKCTTNFPSMIAKAICWPYRVDIICELDLFGNPDKICDPSAVVPQNFGETYVELLKAEKKLFDN 330
                                                   .|..|.|:|.|               
Zfish   201 ---------------------------------------LSQHVKQDFSE--------------- 211

  Fly   331 SSQIVVNYEIKDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMGILQKILCLFMLRMVYVSIN 395
                           .|||:              :..|.:|:::..      .:|:|.:...|..
Zfish   212 ---------------IKSQV--------------QYLKLLFSRIFA------AIFVLYLFLESAM 241

  Fly   396 YYVKYLNDVEFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHI--------FSRTH 452
            |...||..|.|||.|:|...:.                :..||...::...:        |..|.
Zfish   242 YIRSYLMSVRFDNTYLTSGLRK----------------KAVEKGLVVESKDVKNGVKSTSFRITK 290

  Fly   453 HESTTVCFNLLQFLLELVTAGLFILIDHLVVELLQ-----IVRKRSKIVYQQDGEHEVRFNISGV 512
            .|........|...|.|:.....|::||.:..|::     |....|..|       .|..|:. |
Zfish   291 REFFRCLAPALVITLYLLMTVFLIVLDHFLYSLVKSGGPWISNMPSTNV-------SVNINLK-V 347

  Fly   513 GQMARLLRTT-------MHNFNIHEKVSTSLSNKE---CLPNAHVLPKKMYYQLILLYLIIIVLI 567
            |....:|:.|       :.|||   :..|:|.:.:   |...:..|...:...|:.|||....|:
Zfish   348 GTKVPILQLTGTDGYNELFNFN---RTYTALIHSDPNICEAQSSQLNPGVVTALVFLYLFSYTLL 409

  Fly   568 YQSTTFLRMRRVICSFFYYKREKQRILFLYNRIL-----RNRLRSLEFLIHDAE 616
            .......|:||.:.:.|:.::|::|:.||..:|.     |.::.|:|....|.:
Zfish   410 PLDVYARRLRRKVAASFFQQQEERRVEFLIKKIQSKQKERKKVFSIETKFQDED 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 45/213 (21%)
ocstampNP_001014362.1 DC_STAMP 252..438 CDD:462265 44/212 (21%)

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