DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and CG6845

DIOPT Version :9

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_612000.3 Gene:CG6845 / 38019 FlyBaseID:FBgn0035099 Length:672 Species:Drosophila melanogaster


Alignment Length:710 Identity:169/710 - (23%)
Similarity:282/710 - (39%) Gaps:156/710 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FLLGL--VLGFLLWKLA----ALNFTLGRLFVNGATDLYVFIIFVLVTGTIFMLSLPVRAVILLI 94
            :|.||  .|.:..|:|.    .||.|              |.|.|.:...:| .|.|||.::.|.
  Fly    25 YLCGLAVTLAWNWWQLGHLVLGLNLT--------------FAIPVALVLAVF-YSRPVRCIVTLA 74

  Fly    95 FVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEVARVFVCTTVLTYNLSKTRFDLMAKPFTNT 159
            ..:|....||.:|.::||.....||.||::.|...:.|...|...|.........|::.:| .|.
  Fly    75 LPSLCSSRGRAFLISLAFVIAAVGPTANILANLKVMLRSLACGQELLRQALGQMLDVILEP-VNA 138

  Fly   160 LKHMRGD--VEEIRHTFYELQEVLVDLKYAVENSDIEDEKYGDKNTKPIYERWGRETSRMNVSEI 222
            :: :..|  :.|:|........||:         .|:|:......|......|.:....:..:|:
  Fly   139 IQ-LAVDLLMREVRRVLKLAMVVLL---------RIQDQLIAIIKTLKNCAAWLKSIVDLCNTEM 193

  Fly   223 GNGGKELPTPAAVQERFQRNMRNRCKHQLRSGHRACLEVFRNGYRKCTTNF--------PSMIAK 279
            |       ||.|           |||   ::.|.|.:        :|.:..        .:.:..
  Fly   194 G-------TPWA-----------RCK---KTAHHAMI--------RCQSKMGVFKALCHAAKLFL 229

  Fly   280 AICWPYR-VDIICE--LDL-FGNPDKICDPSAVVPQNFGETYVELLKAEKKLFDNSSQIVVNYEI 340
            |:|:|.: :|:.|.  .|| :|..|||           .|.|.|.::..:::||  :.|...:|.
  Fly   230 ALCYPAKIIDVFCSGYWDLSWGLLDKI-----------AERYREFVRHIEEMFD--ANITFEHEF 281

  Fly   341 KDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMGILQKILCLFMLRMVYVSIN-YYVKYLNDV 404
               .|..:..||....|:...:|..::...|..:...:. |||..|:..|:.... :|::|::..
  Fly   282 ---FFDTNSSKSLTDVGEEILQDINKRLSSFIFLSSFVD-ILCWVMVVTVFFKATIFYLRYMHSR 342

  Fly   405 EFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHESTTV----CF---NL 462
            :|.|.::||....:|:|.::...|.:|||...|::||:.:..: ..|..|..::    ||   ..
  Fly   343 QFQNVFLTKILSDIDRRHEKHGYDPLLPLHQLERAKYMKLTSL-RLTLFEFVSIVENACFMATTC 406

  Fly   463 LQ-FLLELVTAGLFILIDHLVVELLQIVRKRSKIVYQQDG---EHEVRFNISGVGQMARLLRTTM 523
            || |.:..:..|||.|:..:           |...:|:.|   ...|...|.|.|.:|.::|...
  Fly   407 LQLFAICFLDYGLFWLLATI-----------SLHGHQETGLEVPAYVDLEIKGGGFVADVMRGIA 460

  Fly   524 HNFN-IHEKVSTSLSNKECLPNAHVLPKK----MYYQLILLYLIIIVLIYQSTTFLRMRRVICSF 583
            :.|. :.:|  :.|....|||    ||.|    .|..::||.|:..:::......||.|.:|.:.
  Fly   461 NAFRPLTQK--SILDVNPCLP----LPVKPDYAEYLIILLLCLLAWLILLAEPYILRTRHLIMAH 519

  Fly   584 FYYKREKQRILFLYNRILRNRLRSLEFLIHDAEDNLATHRIQQQVNVFLWL--RFSCPVAFGWIR 646
            ||.||.|:|.:||||.|..:|....:|:.....:.....|..:....:.||  ||||.:..    
  Fly   520 FYPKRAKERGMFLYNMISEDRTSIFKFIRRRKRNEFNHTRNVKHTRNYTWLNNRFSCLMCM---- 580

  Fly   647 HFKFAKRTCMICRGLEDS-TFTVCGN---------CGLP-----YCDDCAEDLNSVCFQC 691
                    |..|...:.: ..|:||.         |..|     ||..|.|..::.|..|
  Fly   581 --------CSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKCCLC 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:311636 57/206 (28%)
CG6845NP_612000.3 DC_STAMP 344..533 CDD:285077 57/206 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472965
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3726
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3469
SonicParanoid 00.000 Not matched by this tool.
54.870

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