DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and spe-42

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_872213.4 Gene:spe-42 / 353452 WormBaseID:WBGene00007117 Length:774 Species:Caenorhabditis elegans


Alignment Length:774 Identity:154/774 - (19%)
Similarity:280/774 - (36%) Gaps:213/774 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LYGPQSEGSTR---IQCLRRFVTF--LLGLVLGFLL-WKLAALNFTLGRLFVNGATDLYVFIIFV 74
            :|....|..||   |..|.|.:..  |.|:|:.||| :|.:.....:|   .:.:|.::||:||.
 Worm    63 IYDNLFEDGTRANSIVLLFRNILMIELFGIVMYFLLSFKYSQYPEFIG---TSISTIIHVFLIFT 124

  Fly    75 LV---TGTIFMLSL------PVRAVILLIFVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEV 130
            |:   ..|.||:|:      .::.:||::.|.:              ||  .||..|::.|..:|
 Worm   125 LIFPKMMTYFMISIHVMLTTKIKNIILILLVTM--------------AF--EGPAMNVIGNIHQV 173

  Fly   131 ARVFVCTTVLTYNLSKTRFD----------LMAKPFTNTLKHMRGDVEEIRHTFYELQEVLVDLK 185
            |....|..:   ::..:|.|          ::...|...|:::.|.:.:::.....|.|.:.  |
 Worm   174 ASGVACVQI---DVMSSRNDVEGNVMDKGAMLVSRFRALLQNVSGPMNKVKKMLLVLDEKMT--K 233

  Fly   186 YAVENSDIEDEKYGDKNTKPIYERWGRETSRMNVSEIGNGGKELPTPAAVQERFQRNMRNRCKHQ 250
            :.    ||....|                                       |...|:.|:|::.
 Worm   234 FV----DIMRRHY---------------------------------------RVIANLSNQCRNM 255

  Fly   251 LRSGHRACLEVFRNGYRKCTTN---FPS------MIAKA--ICWPYRVDIICELDLFGNPDKICD 304
            |::.:..||::|.:.|..|...   |.|      ||.|.  ||...:          |...::|.
 Worm   256 LKTPYTKCLDIFDDAYFYCKGKARFFGSHGDACEMIQKTAKICHQAK----------GFSTEVCS 310

  Fly   305 -PS--------AVVPQNFGETYVELLK-AEKKLF---------------------DNSSQIVVNY 338
             ||        |.||  |...|.:.:: |.||:|                     ..:..|...|
 Worm   311 LPSIIGKGVKGAAVP--FYAAYFQAIEFAVKKIFYVHIEAAKWALKKVNPVIEEIKKAKNIRAEY 373

  Fly   339 EIKDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMGILQKIL--C----------LFMLRMVY 391
            :..|:....:...:......:.|:.......::.:::.|:..||  |          ::.||.:|
 Worm   374 QSSDDGKPNAADDTTANLRASIKKSLMGIVNVYIRIINIISFILRYCIMPGLLIWPFIYTLRFMY 438

  Fly   392 VSINYYVKYLNDVEFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHEST 456
             :.||     || :|.|.::||.|..:||....:....::||...|..:|:.... :..|..|..
 Worm   439 -NYNY-----ND-DFKNRFLTKEFTKIDQDCAFRGARKVMPLMANESKQYVSRGQ-WKMTEQERP 495

  Fly   457 TVCFNLLQFLLELVTAGLFILIDHLVVELLQIVR---KRSKIVYQQDGEHEVRFNISGVGQMARL 518
            ....::...::..||.....::|:.:...|..|.   .|:.|    |........::|...|:.:
 Worm   496 KFRLDIFITIVSCVTPFFMCMLDYGIFTTLSTVHTLMNRTNI----DTPAHYELKVAGNSSMSDV 556

  Fly   519 LRTTMHNFNIHEKVSTSLSN--KECL--PNAHVLPKKMYYQLILLYLIIIVLIYQSTTFLRMRRV 579
            :...:..|:...|......|  :.|.  ||.....:.|.  :.|:::..:.|......|.|...|
 Worm   557 MNEFLDVFSPFTKSIRDRENRWRRCFNEPNPPNYTENMV--MFLMFIAALFLCRLKAYFGRQTLV 619

  Fly   580 ICSFFYYKREKQRILFLYNRILRNRLRSLEFLIHD-------AEDNLATHRIQQQVNVFLWLRFS 637
            :..:|:..|.:.|.|.|||:||::|...|..::.:       .||.:....:|.:       .|.
 Worm   620 LADYFFPNRVRIRALSLYNKILQSRRNLLTEMLGNNKKDVVGGEDVIIRRTMQSR-------GFV 677

  Fly   638 CPVAFGWIRHFKFAKRTCMIC-----RGLEDSTFTVCGNCGLPYCDDCAEDLNSVCFQC 691
            |              ..|:.|     :..:.....||.:|...||.:|. .:...|.:|
 Worm   678 C--------------SDCVKCEKYDMKVSDQENVRVCVHCSAFYCINCF-SVTLFCVKC 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 39/197 (20%)
spe-42NP_872213.4 DC_STAMP 446..637 CDD:462265 39/197 (20%)

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