DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and Dcst2

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001420000.1 Gene:Dcst2 / 295247 RGDID:1564557 Length:710 Species:Rattus norvegicus


Alignment Length:717 Identity:146/717 - (20%)
Similarity:264/717 - (36%) Gaps:126/717 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GSTRIQCLRRFVTFLLGLVLGFLLWKLAALNFTLGRLFVNGATDLYVFIIFVLVTGTIFM---LS 84
            |..:....|..|....|..||..|    |..:.|..|...|.:.....:..|.:...:.:   .|
  Rat    11 GEEKSSMARAVVRSTCGFTLGLSL----ATAYGLLELLAEGHSPFGCLVTTVTLAAFLGLGMGFS 71

  Fly    85 LPVRAVILLIFVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEVARVFVCTTVLTYNLSKTRF 149
            ..||..:.|:...:..|..|..|...||..::.||.||.:.|....:....|...|..|.:....
  Rat    72 RQVRVSVFLLLPQVFSKQSRLLLLVAAFGLVLQGPCANTLRNFTRASEAVACGAELALNQTAEVL 136

  Fly   150 DLMAKPFTNTLKHMRGDVEEIRHTFYELQEVLVDLKYAVENSDIEDEKYGDKNTKPIYERWGRET 214
            :.:.:|..:.|..::...::.:        |:.|.......|.::..|:..:..:.:: .|    
  Rat   137 ERVKQPLVSALTKIKAIAQKAK--------VVADRVRKFFRSVMDGVKHVARCLQNMW-YW---- 188

  Fly   215 SRMNVSEIGNGGKELPTPAAVQERFQRNMRNRCKHQLRSGHRACLEVFRNGYRKCTTNFPSMIAK 279
             .:::.::                        |..:|.:.:..|..||.:....|....|..  .
  Rat   189 -LLHIGDV------------------------CNSELGNPYTKCARVFDDAKDNCMKVVPRF--H 226

  Fly   280 AICW---PYRVDIICEL----DLFGNPDKICDPSAVVPQNFGETYVELLKAE-KKLFD------N 330
            .:|:   |::: :.|.|    .||          .|:|....:...:.:|.. .||.|      .
  Rat   227 QLCYVLLPFKL-VFCGLANLVQLF----------CVIPMYLQQFLRKTIKTPVMKLLDRVRREFE 280

  Fly   331 SSQIVVNYEIKDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMGILQKILCLFMLRMVYVSIN 395
            .:....:|...|...::|..:.|....:|........:.:.: :||....:|    ..::|:...
  Rat   281 FNMTATHYFSVDLNASRSLSQVALDLHEAVSMKLYTAREVLS-MMGYTMPLL----FGLLYIQAL 340

  Fly   396 YY-VKYLNDVEFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHESTTV- 458
            || ..|||...|||.|||:.|..::..|....:..:|||.::|...|:.....|.....:...: 
  Rat   341 YYRYGYLNWDNFDNVYITRRFLDMEAVRSLAGLRTVLPLSSHEARHYVQPGSFFLTRWEQILYIV 405

  Fly   459 -CFNLLQFLLELVTAGLFILIDHLVVELLQIVRKRSKIVYQQDGEHEVR------FNISGVGQMA 516
             .|||.:.||.::   |.:.:|:.|..:|.:.|      |...||...|      ..:.|.|...
  Rat   406 ETFNLARHLLLVL---LLVFLDYGVFWILDLAR------YHLQGEIVARSPVLVSIKVEGTGYSG 461

  Fly   517 RLLRTTMHNFNIHEKVSTSLSNKECL-------PNAHVLPKKMYYQLILLYLIIIVLIYQSTTFL 574
            .:.|..:..|::.::.:.|:.::.|.       .|.:::...||.   |.:.:.:...|.|    
  Rat   462 NIYRDLVSAFDVLQQGNVSILSRRCALRPSEPDANGYIVIGTMYG---LCFFVTLFGSYVS---- 519

  Fly   575 RMRRVICSFFYYKREKQRILFLYNRILRNRLRSLEFLIHDAEDNLATHRIQQQ--VNVFLWLRFS 637
            |:|||||:.:|..||::||.:|||.:|..|..     |..|.......|...|  :::...|...
  Rat   520 RLRRVICASYYPSREQERITYLYNMLLSRRTN-----IPAAVQRAVRRRAADQGHMSILQVLATR 579

  Fly   638 CPVAFGWIRHFKFAKRTCMIC------RGLEDSTFTVCG--NCGLPYCDDCAEDLNSVCFQCGVV 694
            .|.....:..|...:..|:.|      .|:|:  |..|.  .|...||..|...|::.|..|...
  Rat   580 YPSLSPLLGRFLLHQTYCLGCGQPEEKGGMEN--FVSCSTPGCRGLYCPTCFRLLDNTCSVCASP 642

  Fly   695 LT 696
            |:
  Rat   643 LS 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 51/205 (25%)
Dcst2NP_001420000.1 DC_STAMP 352..542 CDD:462265 51/205 (25%)

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