DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and Dcst1

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001419993.1 Gene:Dcst1 / 295246 RGDID:1307756 Length:734 Species:Rattus norvegicus


Alignment Length:689 Identity:186/689 - (26%)
Similarity:302/689 - (43%) Gaps:87/689 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FLLGLVLGFLLWKLAALNFTLGRLFVNGATDLY----VFIIFVLVT-GTI-FMLSLPVRAVILLI 94
            ||||...|.||    |:.  |.:|.|| ..::|    |..::.|.: |.| :.:|..:|...||:
  Rat    78 FLLGTGTGGLL----AIG--LFQLLVN-PMNIYEEQKVVALYGLTSLGAIGWGISPHIRCASLLL 135

  Fly    95 FVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEVARVFVCTTVLTYNLSKTRFDLMAKPFTNT 159
            ...::||.||.::...|.|.|..||:|||..|..||.....||..|..|.:::.:.:...|....
  Rat   136 VPKMLGKEGRLFIMGYALASIYKGPVANLQYNINEVIASLGCTVELQINNTRSAWRVSTAPLRAV 200

  Fly   160 LKHMRGDVEEIRHTFYELQEVLVDLKYAVENS---DIEDEKYGDKNTKPIYERWGRETSRMNVSE 221
            .|.|....:.::.....:.....||...||::   ..||:   |.:|.|..:..|..|||..:. 
  Rat   201 FKDMLSSKDSLKTEIANVSTSFEDLDAQVESNIGYSPEDK---DMDTAPGTKALGTGTSRARLH- 261

  Fly   222 IGNGGKELPTPAAVQERFQRNMRNRCKHQLRSGHRACLEVFRNGYRKCTTNFP-SMIAKAICWPY 285
                       .:.|..::...:.||.|.:.....:|...|...:::|..... .::...:|.|.
  Rat   262 -----------LSTQMVYELKTKLRCSHVVNKAILSCYRWFDKKHQRCMQRIQVPLLNSLLCLPM 315

  Fly   286 RVDIICELDLFGNPDKI----CDPSAVVPQNFGETYVELLKAEKKLFDNSSQIVVNYEIKDE-QF 345
            :....|      |..|:    |.....|..|||:||..:   .:.:...|.:...|.:||:: |.
  Rat   316 KFKFFC------NIAKVMEIWCHKRIPVEGNFGQTYDSV---NQSIHGLSGEFSANIDIKEQKQS 371

  Fly   346 AKSQLKSA-ERTGQAFKEDFERQKRIFNKVMGILQKIL-CLFMLRMVYVSINYYVKYLNDVEFDN 408
            |...|.:. |......::...:|:......:|::..:| |.|:| :.:.:.:|...|..|:.|||
  Rat   372 AVVGLSTNWEHVSVEVRDYAHQQEARLQWAVGLMHVLLSCTFLL-VFHAAFSYMDNYNWDIRFDN 435

  Fly   409 FYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHESTTVCFNLLQFLLELVTAG 473
            .||:.||..:|.|||:....::||||..||:..     ||........|...|:::.|||.:...
  Rat   436 IYISTYFYQIDARRKKLGKQSLLPLRKAEKTSV-----IFPLKATIQATEMRNVIRELLETLPIL 495

  Fly   474 LFIL----IDHLVVELLQIVRKRSKIVYQQDGEHEVRFNISGVGQMARLLRTTMHNFNIHEKVST 534
            |.:|    ||.::..:...:...|.:.|.....|::..|:.|...:|||||.|:...|.......
  Rat   496 LLLLVLFAIDWVLYSIFDTIGHHSFVQYSFRSSHKLEINVEGDSILARLLRKTIGALNTTSDTEM 560

  Fly   535 SLSNKECLPNAHVLPKKMYYQLIL-LYLIIIVLIYQSTTFLRMRRVICSFFYYKREKQRILFLYN 598
            ..:|..|||.|..|....|::..| ..|::.|.:.|:..: |:||||.:|::.||||:|:|||||
  Rat   561 ETNNMPCLPRAVGLSAGGYFRASLPTCLLMCVCLAQAFGY-RLRRVIAAFYFPKREKKRVLFLYN 624

  Fly   599 RILRNR-----LRSLEFLIHDAEDNLATHRIQQQVN----VFLWLRFSCPVAFGWIRHFKFAKRT 654
            .:||.|     ||....:          .|.:||..    |...|...||:    :|  :..:|.
  Rat   625 ELLRKRSAFTKLRRAAIV----------RRARQQTTPRPPVVDALYRRCPL----LR--RLTRRR 673

  Fly   655 CMICRGLEDSTFTVC--GNCGLPYCDDCAEDLNSVCFQC 691
            |::|:.||.....||  .:|...||..|.:|:...|..|
  Rat   674 CVVCQALETPESYVCPTPDCKALYCRSCWDDMQRQCPVC 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 64/195 (33%)
Dcst1NP_001419993.1 DC_STAMP 433..623 CDD:462265 64/195 (33%)

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