DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and npp-22

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_505962.2 Gene:npp-22 / 179607 WormBaseID:WBGene00007118 Length:588 Species:Caenorhabditis elegans


Alignment Length:250 Identity:47/250 - (18%)
Similarity:91/250 - (36%) Gaps:73/250 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 NDVEFDNFYITKYFKHVDQRRKEQRIDAILPLRTY---EKSKYIDVDHIFSRTHHES-----TTV 458
            |.:|.|: .:.|:|             |:..|||.   ::.:.:||..:.....|..     :..
 Worm   333 NVIETDD-SLLKFF-------------ALHDLRTIAWNDEKRRVDVFSLSQPGKHPRNWKAVSLP 383

  Fly   459 CFNLLQFLLELVTAGLFILI-----DHLVV------ELLQIVRKRSKIVYQQDGEHEVR------ 506
            |..:|..|...:|.....|:     ||.:.      :.|.:.||..::.|:..|:...:      
 Worm   384 CVRMLDELCSRMTVSAARLVGYSWDDHDIENEDVPRDALLMPRKMREMAYRGTGQSRQQKSMAPI 448

  Fly   507 --FNISGVGQMARLLRTTMHNFNIHEKVSTSLSNKECLPNAHVLPKKMYYQLIL----------- 558
              .|...||.::::  :....|.:.||:  .:|..:...||:.  .:..|.|::           
 Worm   449 RSHNTQTVGLLSKI--SNFLGFGVTEKL--VISRFDAHMNAYA--AEALYMLVVDSMGEDRFGVV 507

  Fly   559 ------LYLIIIVLIYQSTTFLRMRRVICSFFYYKREKQRILFLYNRILRNRLRS 607
                  |..::..||....|:.|.:..:.       :|..:.||  ||:...|:|
 Worm   508 QKDLKDLITLLCKLIAAIDTYERAKASVA-------DKSDVTFL--RIVDASLKS 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 40/234 (17%)
npp-22NP_505962.2 Ndc1_Nup 77..580 CDD:462824 46/249 (18%)

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