DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snky and OCSTAMP

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_542452.1 Gene:OCSTAMP / 128506 HGNCID:16116 Length:566 Species:Homo sapiens


Alignment Length:571 Identity:100/571 - (17%)
Similarity:167/571 - (29%) Gaps:217/571 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VTGTIFMLSL----PVRAVILLIFVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEVARVFVC 136
            |.|.:..|||    |||.:..|....|..:.||..|.:.:.|.:....:.|::.|.|...:|..|
Human    87 VCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVLANVGAAGQVLRC 151

  Fly   137 TTVLTYNLSKTRFDLMAKPFTNTLKHMRGDVEEIRHTFYELQEVLVDLKYAVENSDIEDEKYGDK 201
            .|                         .|.:|.:.:|                            
Human   152 VT-------------------------EGSLESLLNT---------------------------- 163

  Fly   202 NTKPIYERWGRETSRMNVSEIGNGGKELPTPAAVQERFQRNMRNRCKHQLRSGHRACLEVFRNGY 266
                                                          .|||.:..||.....:.|.
Human   164 ----------------------------------------------THQLHAASRALGPTGQAGS 182

  Fly   267 RKCTTNFPSMIAKAICWPYRVDIICELDLFGNPDKICDPSAVVPQNFGETYVELLKAEKKLFDNS 331
            |..|                         |...|           |....|:.:|:..:::.::.
Human   183 RGLT-------------------------FEAQD-----------NGSAFYLHMLRVTQQVLEDF 211

  Fly   332 SQIVVNYEIKDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMGILQKILCLFMLRMVYVSINY 396
            |.:        |..|::.....:|.                 |.|       ||||.::..|..|
Human   212 SGL--------ESLARAAALGTQRV-----------------VTG-------LFMLGLLVESAWY 244

  Fly   397 YVKYLNDVEFDNFYITKYFKHVDQRRKEQRIDAIL---PLRTYEKSKYIDVDHIFSRTHHESTTV 458
            ...||.|:.|||.|.|   :.:.||..:.:...:|   |....:.::.        |...|....
Human   245 LHCYLTDLRFDNIYAT---QQLTQRLAQAQATHLLAPPPTWLLQAAQL--------RLSQEELLS 298

  Fly   459 CFNLLQFL-LELVTAGLFILIDHLVVELLQI----VRKRSKIVYQQDGEHEVRFNISG-VGQMAR 517
            |...|..| |.||...:.:..||:...|.|.    .:|...:......:::|.:.:.| :..:..
Human   299 CLLRLGLLALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFN 363

  Fly   518 LLRTTMHNFNIHEKV--STSLSNKECLPNAHVLPKKMYYQLILLYLIIIVLIYQSTTFL-----R 575
            .|.......::|...  ...|::..|    .:||.:.......|....:.|:..||..|     |
Human   364 QLAPESPFLSVHSSYQWELRLTSARC----PLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARR 424

  Fly   576 MRRVICSFFYYKREKQRILFLYNRILRNRLRSLEFLIHDAEDNLATHRIQQ 626
            :|..|.:.|:..:|.:|:..|:.|:.|.         ||      .|:.||
Human   425 LRHAIAASFFTAQEARRVRHLHARLQRR---------HD------RHQGQQ 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 41/206 (20%)
OCSTAMPNP_542452.1 DC_STAMP 254..446 CDD:462265 41/206 (20%)

Return to query results.
Submit another query.