DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snky and snky

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_061503427.1 Gene:snky / 1276056 VectorBaseID:AGAMI1_010729 Length:741 Species:Anopheles gambiae


Alignment Length:723 Identity:208/723 - (28%)
Similarity:328/723 - (45%) Gaps:94/723 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GSTRIQCL--RRFVTFLLGLVLGFLLWKLAALNFTLGRLFVNGATDLYVFIIFVLVT-------- 77
            |..|.:.|  |..:..|.||::|||.::|..:|..|      ..|..:.|.:.|.|.        
Mosquito    30 GEKRTELLLPRALLLALYGLLVGFLFYRLVLVNLDL------PDTVRFYFGLTVAVALGKRQKFP 88

  Fly    78 --------GTIFMLSLP-----------VRAVILLIFVALVGKSGRTYLRAVAFAFIISGPIANL 123
                    |...::|.|           ||.|..|.:|...||:||..|:.:....:::|||.|.
Mosquito    89 YNETAHQLGVFCLISTPLAAVGCSFSAQVRCVCALCWVGFFGKAGRNLLKTLTLTLLLTGPIENA 153

  Fly   124 VENAGEVARVFVCTTVLTYNLSKTRFDLMAKPFTNTLKHMRGDVEEIRHTFYELQEVLVDLKYAV 188
            ..|..||.||..|:..|.:||:.||.|||.|||.|.|...|..:.|::..|..:..::..:...|
Mosquito   154 SLNGREVVRVLTCSAELAFNLTLTRVDLMTKPFQNALLQGRDRLPELKQEFSAIVSIVEPIVREV 218

  Fly   189 ENSDIEDEKYGDKNTKPIYERWGRE--TSRMNVSEIGNGGKELPTP----AAVQERFQRNMRNRC 247
            |:|. .....||          |.|  :..::..|:...|..:..|    ||.|:.:...:..||
Mosquito   219 EHSG-RGGGGGD----------GGEDGSDSLSSEEVSADGAGIDGPIRSAAAYQQAYVAKLNERC 272

  Fly   248 KHQLRSGHRACLEVFRNGYRKCTTNFPSMIAKAICWPYRVDIIC-ELDLFGNPDKICDPSAVVPQ 311
            ..||.:|...|...|...|.:|:.:.|.::...:|||.::|:.| ..:||| ...:|....|:.:
Mosquito   273 LAQLATGVDRCKASFERSYDECSESLPPLVNTLLCWPMKLDVACSSAELFG-VGAVCRMEDVLDE 336

  Fly   312 NFGETYVELLKAEKKLFDNSSQIVVNYEIKDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMG 376
            :||..|..|.:.|.:|......|.::|::.|.:.....:...:.:.|..|| |.::|.....|..
Mosquito   337 DFGANYRLLKQTEHQLTGGVGSIEIDYQVPDLRNHSGYVTIKKASKQMGKE-FSKKKHFLRLVSY 400

  Fly   377 ILQKILCLFMLRMVYVSINYYVKYLNDVEFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKY 441
            .::|:.....||:::.|:.|:..||..:.|:|||||..|:.:..||.|:....:||||..::|:.
Mosquito   401 FVRKVFAFIFLRVIFSSVRYHNAYLWRITFNNFYITDQFRALAARRVEENGFPVLPLRAIQQSEL 465

  Fly   442 IDV-DHIFSRTHHESTTVCFNLLQFLLELVTAGLFILIDHLVVELLQIVRKRSKIVYQQDGEHEV 505
            ||. ..|:::.  |...:..:....|...::..:.:|:|.|:.|.|.||.:.|:|.|.|.|.|.|
Mosquito   466 IDTRAGIWNKL--ELRHIVGSFATLLFHCLSTTVLLLMDALLYETLDIVARHSRIEYHQQGFHGV 528

  Fly   506 RFNISGVGQMARLLRTTMHNFNIHEKVSTSLSNKECLPNAHVLPKKMYYQLILLYLIIIVLIYQS 570
            ...::|.|.:|.|:|.|...|..:|::....|||.|||....|.......:..|:.::.:||...
Mosquito   529 NVTVTGTGALAELVRNTAEGFRTNERLDFHASNKACLPRPVPLSGWTVAGIYGLFALLALLITTE 593

  Fly   571 TTFLRMRRVICSFFYYKREKQRILFLYNRILRNRLRSLEFLIHDAEDNLATHRIQQQVNVFLWLR 635
            ....|.||:||||||..||:.|..:||||:|| :.|:|:..:.:        ||.|       |.
Mosquito   594 AYIQRARRLICSFFYPGREQLRTAYLYNRVLR-QTRTLQATLPE--------RILQ-------LA 642

  Fly   636 FSC----------------PVAFGWIRHFKFAKRTCMICRGLEDSTFTVCGNCGLPYCDDCAEDL 684
            .||                |..|||.|    ..|.|.:|||..........:|.|.||..|.:|:
Mosquito   643 GSCGSCRVLPFCDRLALQHPNWFGWTR----TGRRCAVCRGAGAPQECQRPDCFLCYCAGCWQDI 703

  Fly   685 NSVCFQCG 692
            :..|..||
Mosquito   704 DRQCVVCG 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 64/191 (34%)
snkyXP_061503427.1 None

Return to query results.
Submit another query.