DRSC/TRiP Functional Genomics Resources

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Protein Alignment snky and Dcstamp

DIOPT Version :10

Sequence 1:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001419173.1 Gene:Dcstamp / 103690326 RGDID:1310435 Length:470 Species:Rattus norvegicus


Alignment Length:405 Identity:89/405 - (21%)
Similarity:165/405 - (40%) Gaps:78/405 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 LFGNPDKI------------CDPSAVVPQNFGETYVELLKAEKKLFDNSSQIVVNYEIKDEQFAK 347
            :||:.:.|            |:..|   :|| .|:..|||...:..:....:.....:.|:..:.
  Rat   107 IFGHVENIFSNFRGLLDSMTCNLRA---KNF-STHFPLLKRYIEAIEWIYGLTTPLNVLDDLVSW 167

  Fly   348 SQ-----LKSAERTGQAFKEDFERQKRIFNKVMGIL--------------QKILCLFMLRMVYVS 393
            :|     |.|.....||...|..      .:|:.:|              ||:|.|..|.::.||
  Rat   168 NQTLAVSLFSPSHALQAHMNDTR------GEVLSVLHRMVLTTELLTSVGQKLLALAGLLLILVS 226

  Fly   394 INYYVK-YLNDV--EFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHES 455
            ...::| :|...  :::|.|||:.|...|:..:.|:...:|||...|:.|||.|..: ..|..|.
  Rat   227 TGLFLKRFLGPCGWKYENVYITRQFVLFDEEERCQQRPCVLPLNRKERKKYIIVPSL-KLTPKER 290

  Fly   456 TTVCFNLLQFLLELVTAGLFILIDHLVVELLQIVRKRSKIVYQQDGEHEVRFNISGVGQMARLLR 520
            ..:....|..|..|....||..:|:|:..|:..|.|:    :|.....||...:.|..|..   .
  Rat   291 RNLGLFFLPVLTYLYMWMLFATVDYLLYRLISSVNKQ----FQSLPGLEVHLRLHGEKQGT---H 348

  Fly   521 TTMHN--FNIHEKVSTSLSNKECLPNAHVLPKKMYYQLILLYLIIIVLIYQSTTFLRMRRVICSF 583
            ..:|:  |||      |:....|:....:...:.:..|.::.|.:::|...|:..::::.::...
  Rat   349 GVIHDSAFNI------SMFEPSCILKPRLSVSQTWVPLSIILLTLVILGLLSSMLMQLKILVSVS 407

  Fly   584 FYYKREKQRILFLYNRILRNRLRSLEFLIHDAEDNLATHRIQQQVNVFLWLRFSCPVAFGWIRHF 648
            ||.|.|::||.:|:.::|..|.:.   .:.:|:..|:.:        |..:.|       |:...
  Rat   408 FYPKVERERIEYLHAKLLEKRSKQ---PLGEADRKLSLY--------FKKIHF-------WLPVL 454

  Fly   649 KFAKRTCMICRGLED 663
            |..::..||....:|
  Rat   455 KMTRKKHMIPANEDD 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 48/192 (25%)
DcstampNP_001419173.1 DC_STAMP 242..421 CDD:462265 48/192 (25%)

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