Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001189901.1 | Gene: | AT3G15410 / 820780 | AraportID: | AT3G15410 | Length: | 590 | Species: | Arabidopsis thaliana |
Alignment Length: | 469 | Identity: | 115/469 - (24%) |
---|---|---|---|
Similarity: | 194/469 - (41%) | Gaps: | 93/469 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 LVVQCGEGQLDVLPIALN--PSIQRLVIKSNKIKTIDSSIQFYAELTFLDLSSNHLMTIPQRTFA 103
Fly 104 YQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGY 168
Fly 169 LDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLE 233
Fly 234 LKGASLR--------------NISHDSFLGLQ-------ELRILDLSDNRLDRI-------PSVG 270
Fly 271 L-----SKLVRLEQLSLGQNDFE-VISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYL 329
Fly 330 NLSSNKMLLEVQEGALSGLSQLKHVVLKAN--------ALTSL-----------------AEGLF 369
Fly 370 PWKDLQTLDLSENPLSCD-----CRVMWLHNLLVAK---NASQDDVSEL------------LCEF 414
Fly 415 PERLRG-ESLRHLN 427 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 4/17 (24%) |
LRR_8 | 83..142 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 3/22 (14%) | ||
LRR_RI | 129..421 | CDD:238064 | 91/371 (25%) | ||
LRR_8 | 132..190 | CDD:290566 | 17/57 (30%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 203..263 | CDD:290566 | 23/80 (29%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 8/43 (19%) | ||
LRR_8 | 252..308 | CDD:290566 | 19/68 (28%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 10/34 (29%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 325..384 | CDD:290566 | 21/83 (25%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 7/46 (15%) | ||
AT3G15410 | NP_001189901.1 | LRR_8 | 53..109 | CDD:290566 | 7/31 (23%) |
leucine-rich repeat | 53..75 | CDD:275380 | |||
leucine-rich repeat | 76..98 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 99..121 | CDD:275380 | 4/21 (19%) | ||
leucine-rich repeat | 122..137 | CDD:275380 | 7/14 (50%) | ||
leucine-rich repeat | 145..167 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 168..214 | CDD:275380 | 12/46 (26%) | ||
LRR_RI | <202..424 | CDD:238064 | 63/230 (27%) | ||
LRR_8 | 213..271 | CDD:290566 | 20/60 (33%) | ||
leucine-rich repeat | 215..237 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 238..260 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 259..316 | CDD:290566 | 13/56 (23%) | ||
leucine-rich repeat | 261..282 | CDD:275380 | 4/20 (20%) | ||
leucine-rich repeat | 306..359 | CDD:275380 | 15/52 (29%) | ||
LRR_RI | 358..562 | CDD:238064 | 42/182 (23%) | ||
leucine-rich repeat | 367..388 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 389..411 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 411..468 | CDD:290566 | 13/56 (23%) | ||
leucine-rich repeat | 412..435 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 436..459 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 460..483 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 484..506 | CDD:275380 | 4/21 (19%) | ||
LRR_8 | 505..564 | CDD:290566 | 6/30 (20%) | ||
leucine-rich repeat | 507..529 | CDD:275380 | 2/21 (10%) | ||
leucine-rich repeat | 530..553 | CDD:275380 | 3/5 (60%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |