| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001103124.1 | Gene: | Gp1ba / 691992 | RGDID: | 1310239 | Length: | 717 | Species: | Rattus norvegicus |
| Alignment Length: | 467 | Identity: | 112/467 - (23%) |
|---|---|---|---|
| Similarity: | 165/467 - (35%) | Gaps: | 110/467 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 143 SELHQGTFTPLLKIE---ELNLGENRIGYL--DPKAFDGLSQLRILYLDDNALTTVPDPVIFQAM 202
Fly 203 PSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIP 267
Fly 268 SVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLS 332
Fly 333 SNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLL 397
Fly 398 VAKNASQDDVSELLCEFPERL----RGESLRHL--NPAMMGCTHADPRKQALIGALLVGS----- 451
Fly 452 -------------AATITALALVLYRCRHKIRETIKGGLWGNSALG-----------RKEREYQK 492
Fly 493 TFCD---------EDYMSRHQHHPCSLGIHSTFPNTYTAPHHPGATHHYGMCPMPVNDLGAIDPQ 548
Fly 549 QKFQQLVVPTAT 560 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | |
| LRR_8 | 83..142 | CDD:290566 | |||
| leucine-rich repeat | 84..107 | CDD:275380 | |||
| leucine-rich repeat | 108..131 | CDD:275380 | |||
| LRR_RI | 129..421 | CDD:238064 | 78/286 (27%) | ||
| LRR_8 | 132..190 | CDD:290566 | 14/51 (27%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 3/11 (27%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 6/27 (22%) | ||
| leucine-rich repeat | 180..204 | CDD:275380 | 6/23 (26%) | ||
| LRR_8 | 203..263 | CDD:290566 | 15/59 (25%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 2/22 (9%) | ||
| LRR_8 | 252..308 | CDD:290566 | 22/55 (40%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 5/20 (25%) | ||
| LRR_8 | 325..384 | CDD:290566 | 20/58 (34%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 11/23 (48%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 6/21 (29%) | ||
| Gp1ba | NP_001103124.1 | LRRNT | 20..49 | CDD:214470 | 6/28 (21%) |
| LRR_RI | <50..176 | CDD:238064 | 46/160 (29%) | ||
| LRR_8 | 51..105 | CDD:290566 | 21/80 (26%) | ||
| leucine-rich repeat | 51..72 | CDD:275380 | 6/21 (29%) | ||
| leucine-rich repeat | 73..94 | CDD:275380 | 9/46 (20%) | ||
| LRR_8 | 94..152 | CDD:290566 | 22/59 (37%) | ||
| leucine-rich repeat | 95..117 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 118..141 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 141..198 | CDD:290566 | 19/58 (33%) | ||
| leucine-rich repeat | 142..165 | CDD:275380 | 5/23 (22%) | ||
| LRR_4 | 164..204 | CDD:289563 | 15/40 (38%) | ||
| leucine-rich repeat | 166..189 | CDD:275380 | 11/23 (48%) | ||
| leucine-rich repeat | 190..211 | CDD:275380 | 6/20 (30%) | ||
| TPKR_C2 | 221..281 | CDD:301599 | 17/81 (21%) | ||
| TonB_N | 404..523 | CDD:292650 | 5/15 (33%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR24373 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||