| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006498564.1 | Gene: | Hmcn2 / 665700 | MGIID: | 2677838 | Length: | 5092 | Species: | Mus musculus |
| Alignment Length: | 917 | Identity: | 169/917 - (18%) |
|---|---|---|---|
| Similarity: | 293/917 - (31%) | Gaps: | 344/917 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 25 AGLANC----PPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYA--- 82
Fly 83 ---ELTF------------LDLSSNHLMTI----PQRTFAYQKKLQEVHLNHNKIGQISNKTFIG 128
Fly 129 LSAVTVLNLRGNQISEL-----------------HQGTFTPL----------------------- 153
Fly 154 -LKIEELNLGEN--------------------RIGYLDPKAFDGLSQLRIL---YLDDNALTT-V 193
Fly 194 PDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLK----GLTRLELKGASLRNISHDSFLGLQELR 254
Fly 255 IL-------DLSDNRLDRI---------PSVGLSKLVRL--------EQLSLGQNDFEVISEGAF 295
Fly 296 MGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSN---------KMLLEV-----QEGALS 346
Fly 347 GLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDC--------RVMWL---------- 393
Fly 394 -HNLLVAKNA-----SQDDVSELLCEFPERLRGESLRHLN------PAMMGCTHADPRKQALIGA 446
Fly 447 LLVGSAATITALAL----------------------VLYRCRHKIRETIKGGLWGN--------S 481
Fly 482 ALGRKEREYQKTFCDEDYMSRHQHHPCSLGIHSTFPNTYTAPHHPGATHHYGMCPMPVNDLGAID 546
Fly 547 PQQKFQQLVVPTATMISEKKLNNNKALV--SQGAIDDSASFVLHMKSATMGRDVHQQNPQLNHYT 609
Fly 610 ----KPQFLSATATVGDSCYSYADVPMVHGAPLGGPNQPQ--------LRLTQEHFKQRELYDQE 662
Fly 663 MGSEILDHNYIYSNTHYSMPLEQLGRSK-------TPTPP-----------PMPPALPLRNGL-- 707
Fly 708 -CATTGR 713 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 2/17 (12%) |
| LRR_8 | 83..142 | CDD:290566 | 13/74 (18%) | ||
| leucine-rich repeat | 84..107 | CDD:275380 | 8/38 (21%) | ||
| leucine-rich repeat | 108..131 | CDD:275380 | 4/22 (18%) | ||
| LRR_RI | 129..421 | CDD:238064 | 74/422 (18%) | ||
| LRR_8 | 132..190 | CDD:290566 | 18/121 (15%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 7/63 (11%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 5/42 (12%) | ||
| leucine-rich repeat | 180..204 | CDD:275380 | 7/27 (26%) | ||
| LRR_8 | 203..263 | CDD:290566 | 14/70 (20%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 5/26 (19%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 4/22 (18%) | ||
| LRR_8 | 252..308 | CDD:290566 | 16/79 (20%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 8/38 (21%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 6/30 (20%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 4/20 (20%) | ||
| LRR_8 | 325..384 | CDD:290566 | 9/72 (13%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 7/37 (19%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 0/21 (0%) | ||
| Hmcn2 | XP_006498564.1 | vWFA | 38..196 | CDD:238119 | |
| Ig | 445..511 | CDD:319273 | |||
| IG | 525..605 | CDD:214652 | |||
| I-set | 609..693 | CDD:369462 | |||
| IG | 707..783 | CDD:214652 | |||
| IG_like | 793..876 | CDD:214653 | |||
| I-set | 889..969 | CDD:369462 | 7/21 (33%) | ||
| Ig | 992..1058 | CDD:386229 | 13/71 (18%) | ||
| IG | 1076..1157 | CDD:214652 | 8/80 (10%) | ||
| Ig | 1161..1242 | CDD:386229 | 21/91 (23%) | ||
| Ig | 1262..1336 | CDD:386229 | 20/95 (21%) | ||
| I-set | 1345..1429 | CDD:369462 | 20/111 (18%) | ||
| I-set | 1449..1523 | CDD:369462 | 8/81 (10%) | ||
| IG | 1553..1633 | CDD:214652 | 17/88 (19%) | ||
| IGc2 | 1654..1716 | CDD:197706 | 9/61 (15%) | ||
| Ig | 1741..1819 | CDD:386229 | 3/7 (43%) | ||
| Ig | 1839..1903 | CDD:386229 | |||
| I-set | 1907..1986 | CDD:369462 | |||
| Ig_3 | 1998..2073 | CDD:372822 | |||
| Ig | 2092..2179 | CDD:386229 | |||
| Ig | 2183..2273 | CDD:386229 | |||
| Ig | 2291..2367 | CDD:386229 | |||
| IGc2 | 2389..2451 | CDD:197706 | |||
| I-set | 2476..2554 | CDD:369462 | |||
| I-set | 2558..2650 | CDD:369462 | |||
| I-set | 2668..2740 | CDD:369462 | |||
| Ig | 2782..2859 | CDD:386229 | |||
| I-set | 2876..2954 | CDD:369462 | |||
| I-set | 2966..3046 | CDD:369462 | |||
| I-set | 3050..3141 | CDD:369462 | |||
| Ig | 3145..3233 | CDD:386229 | |||
| Ig | 3256..3320 | CDD:319273 | |||
| Ig | 3347..3422 | CDD:386229 | |||
| IG_like | 3436..3511 | CDD:214653 | |||
| IGc2 | 3530..3592 | CDD:197706 | |||
| Ig | 3614..3695 | CDD:386229 | |||
| I-set | 3699..3786 | CDD:369462 | |||
| Ig | 3789..3874 | CDD:386229 | |||
| Ig | 3900..3967 | CDD:319273 | |||
| I-set | 3974..4060 | CDD:369462 | |||
| Ig | 4064..4151 | CDD:386229 | |||
| I-set | 4155..4240 | CDD:369462 | |||
| IGc2 | 4259..4321 | CDD:197706 | |||
| I-set | 4335..4421 | CDD:369462 | |||
| G2F | 4423..4605 | CDD:369383 | |||
| FXa_inhibition | 4664..4699 | CDD:373209 | |||
| EGF_CA | 4701..4744 | CDD:311536 | |||
| EGF_CA | 4746..4783 | CDD:214542 | |||
| EGF_CA | 4789..4829 | CDD:214542 | |||
| EGF_CA | 4896..4935 | CDD:214542 | |||
| EGF_CA | 4936..4974 | CDD:214542 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR24373 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||