Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001094861.1 | Gene: | LINGO3 / 645191 | HGNCID: | 21206 | Length: | 592 | Species: | Homo sapiens |
Alignment Length: | 490 | Identity: | 124/490 - (25%) |
---|---|---|---|
Similarity: | 194/490 - (39%) | Gaps: | 99/490 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 WCILASI------GVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKI 71
Fly 72 KTIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLN 136
Fly 137 LRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQA 201
Fly 202 MPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFL---GLQELRI-------- 255
Fly 256 -------------LDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVN 307
Fly 308 GALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLF-PW 371
Fly 372 KDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSEL-LCEFPERLRGESLRHLNPAMM---- 431
Fly 432 GCTHADPRKQALIGALLVGSAATITALALVLYRCR 466 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 0/17 (0%) |
LRR_8 | 83..142 | CDD:290566 | 19/58 (33%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 129..421 | CDD:238064 | 84/317 (26%) | ||
LRR_8 | 132..190 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 203..263 | CDD:290566 | 15/83 (18%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 6/25 (24%) | ||
LRR_8 | 252..308 | CDD:290566 | 14/76 (18%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 5/43 (12%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 5/20 (25%) | ||
LRR_8 | 325..384 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 6/22 (27%) | ||
LINGO3 | NP_001094861.1 | LRRNT | 24..58 | CDD:214470 | 11/56 (20%) |
LRR 1 | 55..76 | 5/20 (25%) | |||
LRR_8 | 57..138 | CDD:290566 | 27/80 (34%) | ||
LRR_4 | 59..95 | CDD:289563 | 10/35 (29%) | ||
leucine-rich repeat | 59..79 | CDD:275380 | 5/19 (26%) | ||
LRR 2 | 79..100 | 6/20 (30%) | |||
leucine-rich repeat | 80..103 | CDD:275380 | 7/22 (32%) | ||
LRR 3 | 103..124 | 9/20 (45%) | |||
leucine-rich repeat | 104..127 | CDD:275380 | 11/22 (50%) | ||
LRR_RI | 111..>286 | CDD:238064 | 43/175 (25%) | ||
LRR_8 | 127..>172 | CDD:290566 | 15/45 (33%) | ||
LRR 4 | 127..148 | 6/20 (30%) | |||
leucine-rich repeat | 128..151 | CDD:275380 | 7/22 (32%) | ||
LRR 5 | 151..172 | 8/21 (38%) | |||
leucine-rich repeat | 152..199 | CDD:275380 | 14/47 (30%) | ||
LRR 6 | 175..196 | 5/20 (25%) | |||
LRR_8 | 198..258 | CDD:290566 | 9/59 (15%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 4/22 (18%) | ||
LRR 7 | 207..228 | 3/20 (15%) | |||
leucine-rich repeat | 224..247 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 247..303 | CDD:290566 | 12/55 (22%) | ||
LRR 8 | 247..268 | 3/20 (15%) | |||
leucine-rich repeat | 248..271 | CDD:275380 | 3/22 (14%) | ||
LRR 9 | 271..292 | 6/20 (30%) | |||
leucine-rich repeat | 272..293 | CDD:275380 | 6/20 (30%) | ||
LRR 10 | 295..316 | 8/46 (17%) | |||
leucine-rich repeat | 296..319 | CDD:275380 | 10/48 (21%) | ||
LRR 11 | 319..340 | 7/20 (35%) | |||
leucine-rich repeat | 322..343 | CDD:275380 | 6/20 (30%) | ||
I-set | 407..497 | CDD:254352 | 8/31 (26%) | ||
Ig | 422..490 | CDD:299845 | 3/9 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6410 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.040 |