Protein Alignment trn and LOC5666906

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_001688065.2
• Gene: LOC5666906 / 5666906
• VectorBaseID: AGAMI1_008944
• Length: 489
• Species: Anopheles gambiae
• Alignment Length: 463
• Identity: 115/463 - (24%)
• Similarity: 189/463 - (40%)
• Gaps: 90/463 - (19%)

  Fly    75 DSSIQF---------------YAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNK 124
            |:||.|               :..:.:|...:.|:..:...|||..::|||:||..|::.:::|.
Mosquito    64 DTSIAFRDSSMVVLPKKIFETFPAIQYLSSDACHIQKLLGGTFANAQRLQELHLYDNRLTRLNNF 128

  Fly   125 TFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNA 189
            .|.|...:.:|:|..|.|.:|.:..|..|..:..|.:.||::..|....|.||.:|:||.|..|.
Mosquito   129 VFNGALQLEILSLYNNTIKQLEEHAFDGLGHLRLLYMDENQLEKLPEGLFSGLEELQILELQHNR 193

  Fly   190 LTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELR 254
            :..:.|.. |...|.|.||.|..|.:.:......|.|..|..|::    .||...:.|: .:.||
Mosquito   194 IKEINDDQ-FVLCPMLRELNLSANMISTFNMSQLQSLNKLETLDI----ARNYLDEVFV-TKYLR 252

  Fly   255 ILDLSDNRLDRI----------PSVGLS-----------KLVRLEQLSLGQNDFEVISEGAFMGL 298
            .|:..:|::.||          ..:.||           |...|.:|.:..|:...:....|..:
Mosquito   253 TLNAQENQISRIVMDQGDFFQLTHLNLSRNNIANINNIFKFRNLIELDVSYNELVTLDFVIFAFM 317

  Fly   299 KQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTS 363
            |.||.:::|.. ||..:..|..|...:|..|||:.||.|. :....|.....|:::.|..|.|..
Mosquito   318 KNLKDIKLNNN-RLWILDNGIPSPAKSLRSLNLAHNKFLY-LDLAVLDTFPALEYIYLHGNDLID 380

  Fly   364 L----AEGLFPWKDLQTLDLSENPLSCDC-RVMWLHNLLVA-----KNASQDDVSELLCEFPERL 418
            :    .|..||:..|.:.|.::    .|| .:|.:..||..     .|.:::      |..||:.
Mosquito   381 MQMEEIEQNFPYLTLVSCDNND----WDCINLMHIVTLLERAYVKWSNGNRN------CTRPEQH 435

  Fly   419 RGESLRHLNPAMMGCTHADPRKQALIGALLVGSAATITALALVLYRCRHKIRETIKGGLWGNSAL 483
            |          .:.||.|:...:           ..|..|...:|:.|..|::.|    ..|:.|
Mosquito   436 R----------YICCTSAEHHLR-----------EKIVRLTREIYKSRKMIKQLI----MENAEL 475

  Fly   484 GRKEREYQ 491
             |.|.|.|
Mosquito   476 -RSEVEMQ 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	3/4 (75%)
		LRR	82..406	CDD:443914	92/354 (26%)
		leucine-rich repeat	84..107	CDD:275380	5/22 (23%)
		leucine-rich repeat	108..131	CDD:275380	9/22 (41%)
		leucine-rich repeat	132..155	CDD:275380	7/22 (32%)
		leucine-rich repeat	156..179	CDD:275380	7/22 (32%)
		leucine-rich repeat	180..204	CDD:275380	7/23 (30%)
		leucine-rich repeat	205..228	CDD:275380	7/22 (32%)
		leucine-rich repeat	229..252	CDD:275380	5/22 (23%)
		leucine-rich repeat	253..276	CDD:275380	9/43 (21%)
		leucine-rich repeat	277..300	CDD:275380	4/22 (18%)
		leucine-rich repeat	301..322	CDD:275380	6/20 (30%)
		leucine-rich repeat	326..350	CDD:275380	8/23 (35%)
		leucine-rich repeat	351..373	CDD:275380	7/25 (28%)
		LRRCT	382..434	CDD:214507	10/57 (18%)
LOC5666906	XP_001688065.2	None