Protein Alignment trn and LOC5666870

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_061507546.1
• Gene: LOC5666870 / 5666870
• VectorBaseID: AGAMI1_003343
• Length: 465
• Species: Anopheles gambiae
• Alignment Length: 353
• Identity: 78/353 - (22%)
• Similarity: 139/353 - (39%)
• Gaps: 77/353 - (21%)

  Fly    59 PSIQRLVIKSNKIKTIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISN 123
            |.::..:..||            ..:..|::|...|..:|| |.....|::.:.:...|:..:..
Mosquito   138 PEMRAFIAGSN------------THIESLEISQCLLDRMPQ-TLPKMTKMKNLSIRQCKLTVVRL 189

  Fly   124 KTFIGLSAVTVLNLRGNQISELHQGTFTP--LLKIEELNLGENRIGYLDPKAFDGLSQLRILYLD 186
            ..|.....:.:|:|..|||.:|...|..|  :|.||.|.|..|.:.:||...|..:|||..|::.
Mosquito   190 DMFADNQILKILDLSYNQIRQLLPATERPARMLSIETLVLSGNLLQHLDMTDFKSMSQLLKLHVG 254

  Fly   187 DNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQ 251
            .|.:.:: :.::...|.:|.:.:|..|.:.::      ||:.||                   |.
Mosquito   255 GNLIVSL-NALLPITMKNLIDFWLEANKITAL------DLRNLT-------------------LP 293

  Fly   252 ELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNG-------- 308
            :|..|.|..|.|.|:|.:..| |.:|..|||..|:...:....|.....|.:::::.
Mosquito   294 KLESLGLDGNALTRLPFLPRS-LPKLNSLSLMSNNLTQLDLSYFRPYPNLNKIDISYNQITSVRT 357

  Fly   309 -----------ALRLKRV----MTGAFSDNGNLEYLNLSSNKMLL--EVQEGALSGLSQLKHVVL 356
                       .||..::    :||.  |..|:..|.|..|::.:  .|.|       :..::.|
Mosquito   358 SSPVRLSVSTLDLRYNQITTFNLTGC--DTPNITLLLLGQNRLTVFPPVYE-------KYPNIRL 413

  Fly   357 KANALTSLAEGLFPWKD-LQTLDLSENP 383
            ..|......:.|..:|: :|..||...|
Mosquito   414 SINWNFLFCDTLLYYKEKIQKYDLMVEP 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	2/17 (12%)
		LRR	82..406	CDD:443914	75/330 (23%)
		leucine-rich repeat	84..107	CDD:275380	6/22 (27%)
		leucine-rich repeat	108..131	CDD:275380	2/22 (9%)
		leucine-rich repeat	132..155	CDD:275380	8/24 (33%)
		leucine-rich repeat	156..179	CDD:275380	8/22 (36%)
		leucine-rich repeat	180..204	CDD:275380	4/23 (17%)
		leucine-rich repeat	205..228	CDD:275380	5/22 (23%)
		leucine-rich repeat	229..252	CDD:275380	3/22 (14%)
		leucine-rich repeat	253..276	CDD:275380	9/22 (41%)
		leucine-rich repeat	277..300	CDD:275380	6/22 (27%)
		leucine-rich repeat	301..322	CDD:275380	5/43 (12%)
		leucine-rich repeat	326..350	CDD:275380	5/25 (20%)
		leucine-rich repeat	351..373	CDD:275380	3/21 (14%)
		LRRCT	382..434	CDD:214507	1/2 (50%)
LOC5666870	XP_061507546.1	None