| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017210255.1 | Gene: | chadla / 565474 | ZFINID: | ZDB-GENE-121205-4 | Length: | 791 | Species: | Danio rerio |
| Alignment Length: | 764 | Identity: | 165/764 - (21%) |
|---|---|---|---|
| Similarity: | 285/764 - (37%) | Gaps: | 209/764 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 12 IWCILASIGVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDS 76
Fly 77 SIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQ 141
Fly 142 ISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLA 206
Fly 207 ELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGL 271
Fly 272 SKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKM 336
Fly 337 LLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRV----MWLHNLL 397
Fly 398 VAKNASQDDVSEL-LCEFPERLRGESLRHLNPAMMGCTHADPRKQALIGALLVGSAATITALALV 461
Fly 462 LYRCRHKIRETIKGGLWGNSAL--GRKERE---YQKTF----------CDEDYMSRH--QHHPCS 509
Fly 510 LGIHSTFPNTYTAP-----------HH------PG----ATHHYGMCPMPVNDLGAIDPQQKFQQ 553
Fly 554 LVVPTATMISEKKLNNNKALVSQGAIDDSASFVLHMKSATMGRDVHQQNPQLNHYTKPQFLSATA 618
Fly 619 T-VGDSCYSYADVPMVHGAPLGGPNQPQLRLTQEHFKQREL-------YDQEMGSEILDHNYIYS 675
Fly 676 NTHYSMPLEQLGRSKTPTPPPMPPALPLRNGLCATTGRRSFQQKSASQK 724 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 1/17 (6%) |
| LRR_8 | 83..142 | CDD:290566 | 11/58 (19%) | ||
| leucine-rich repeat | 84..107 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 108..131 | CDD:275380 | 1/22 (5%) | ||
| LRR_RI | 129..421 | CDD:238064 | 79/296 (27%) | ||
| LRR_8 | 132..190 | CDD:290566 | 23/57 (40%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 180..204 | CDD:275380 | 9/23 (39%) | ||
| LRR_8 | 203..263 | CDD:290566 | 21/59 (36%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 252..308 | CDD:290566 | 11/55 (20%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 3/22 (14%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 0/20 (0%) | ||
| LRR_8 | 325..384 | CDD:290566 | 17/58 (29%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 7/23 (30%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 6/21 (29%) | ||
| chadla | XP_017210255.1 | LRRNT | 22..49 | CDD:279764 | 11/30 (37%) |
| leucine-rich repeat | 55..76 | CDD:275380 | 7/39 (18%) | ||
| LRR_8 | 75..135 | CDD:290566 | 24/83 (29%) | ||
| leucine-rich repeat | 77..100 | CDD:275380 | 8/46 (17%) | ||
| leucine-rich repeat | 101..124 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 125..148 | CDD:275380 | 9/23 (39%) | ||
| leucine-rich repeat | 149..172 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 172..231 | CDD:290566 | 17/58 (29%) | ||
| leucine-rich repeat | 173..196 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 197..220 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 221..243 | CDD:275380 | 3/21 (14%) | ||
| LRR_8 | 242..300 | CDD:290566 | 18/85 (21%) | ||
| leucine-rich repeat | 244..267 | CDD:275380 | 7/23 (30%) | ||
| leucine-rich repeat | 417..437 | CDD:275380 | 3/19 (16%) | ||
| LRR_8 | 436..496 | CDD:290566 | 13/79 (16%) | ||
| leucine-rich repeat | 438..461 | CDD:275380 | 5/25 (20%) | ||
| LRR_RI | <451..658 | CDD:238064 | 36/193 (19%) | ||
| leucine-rich repeat | 462..485 | CDD:275380 | 7/25 (28%) | ||
| leucine-rich repeat | 486..510 | CDD:275380 | 7/36 (19%) | ||
| leucine-rich repeat | 511..535 | CDD:275380 | 2/23 (9%) | ||
| LRR_8 | 535..594 | CDD:290566 | 10/67 (15%) | ||
| leucine-rich repeat | 536..559 | CDD:275380 | 3/22 (14%) | ||
| leucine-rich repeat | 560..583 | CDD:275380 | 4/31 (13%) | ||
| leucine-rich repeat | 584..608 | CDD:275380 | 6/23 (26%) | ||
| leucine-rich repeat | 609..633 | CDD:275380 | 1/2 (50%) | ||
| leucine-rich repeat | 634..656 | CDD:275380 | |||
| LRRCT | 664..>699 | CDD:214507 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C170596584 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR24373 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.940 | |||||