Protein Alignment trn and lrrc4cb

DIOPT Version :9

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_005166545.1
• Gene: lrrc4cb / 564462
• ZFINID: ZDB-GENE-080327-5
• Length: 631
• Species: Danio rerio
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380
		LRR_8	83..142	CDD:290566
		leucine-rich repeat	84..107	CDD:275380
		leucine-rich repeat	108..131	CDD:275380
		LRR_RI	129..421	CDD:238064
		LRR_8	132..190	CDD:290566
		leucine-rich repeat	132..155	CDD:275380
		leucine-rich repeat	156..179	CDD:275380
		leucine-rich repeat	180..204	CDD:275380
		LRR_8	203..263	CDD:290566
		leucine-rich repeat	205..228	CDD:275380
		leucine-rich repeat	229..252	CDD:275380
		LRR_8	252..308	CDD:290566
		leucine-rich repeat	253..276	CDD:275380
		leucine-rich repeat	277..300	CDD:275380
		leucine-rich repeat	301..322	CDD:275380
		LRR_8	325..384	CDD:290566
		leucine-rich repeat	326..350	CDD:275380
		leucine-rich repeat	351..373	CDD:275380
lrrc4cb	XP_005166545.1	LRRNT	48..81	CDD:214470
		LRR_8	77..137	CDD:290566
		leucine-rich repeat	79..102	CDD:275380
		LRR_RI	82..>281	CDD:238064
		leucine-rich repeat	103..126	CDD:275380
		LRR_8	125..180	CDD:290566
		leucine-rich repeat	127..150	CDD:275380
		leucine-rich repeat	151..174	CDD:275380
		leucine-rich repeat	175..199	CDD:275380
		leucine-rich repeat	200..221	CDD:275380
		LRR_8	221..280	CDD:290566
		leucine-rich repeat	222..245	CDD:275380
		leucine-rich repeat	246..269	CDD:275380
		leucine-rich repeat	270..291	CDD:275380
		LRRCT	302..352	CDD:214507
		I-set	355..443	CDD:254352
		Ig	372..439	CDD:143165

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910