Protein Alignment trn and zgc:153913

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: NP_001073448.1
• Gene: zgc:153913 / 559700
• ZFINID: ZDB-GENE-061103-397
• Length: 496
• Species: Danio rerio
• Alignment Length: 457
• Identity: 121/457 - (26%)
• Similarity: 204/457 - (44%)
• Gaps: 69/457 - (15%)

  Fly     5 MMIAFVGIWCILASIGVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSN 69
            :::..:.::|     ||       .||..|||...:.:| |.:.::..||:.::..::.|::.::
Zfish     8 VLLVLIHLYC-----GV-------CCPEPCQCFSGSKLV-CSDDRMKSLPVNISTQVRELIVVAS 59

  Fly    70 KIKTID----------SSIQF---------------YAELTFLDLSSNHL-MTIPQRTFAYQKKL 108
            .|..:|          |.:.|               ..||..|::|.|.. |::..:||:....|
Zfish    60 GIPDLDQQSFPETLRLSKLVFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNL 124

  Fly   109 QEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKA 173
            ..:.||:||:..:....|..|..:.:|.||||.:|.|....|..|.:::||:|..|:|..|..:.
Zfish   125 TRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTEL 189

  Fly   174 FDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGAS 238
            |...|:||:|.|..|.:..:||. ||..:..|.||.|..|.::.:...:|.  ..|..|.||...
Zfish   190 FQNNSELRVLSLQANKIPNLPDG-IFTHLDHLQELNLRSNLIRVLTPGSFP--ASLKTLILKKNL 251

  Fly   239 LRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKR 303
            |..:::..|..|..:..||||.|.|..:|:.....|:.||.|.|.:|....::...|.||..:|.
Zfish   252 LEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKS 316

  Fly   304 LEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGL 368
            :                       ||..:|   |:.|....|.....|:.:.|..|:|.|:..|.
Zfish   317 V-----------------------YLQKNS---LISVDAHLLKDQHDLQLLDLSNNSLRSIPSGF 355

  Fly   369 FPWKDLQ-TLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSELLCEFPERLRGESLRHLNPAMMG 432
            |...|.| ..:|..||.||||.:.:.::.|...:....|:|.:.||.||.::|.:||.::...:.
Zfish   356 FEDLDFQCVFELRGNPWSCDCGIHYFYDWLKYNHKHVKDLSRVSCEAPELIQGHNLRSVDREQLV 420

  Fly   433 CT 434
            |:
Zfish   421 CS 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	4/27 (15%)
		LRR	82..406	CDD:443914	94/325 (29%)
		leucine-rich repeat	84..107	CDD:275380	7/23 (30%)
		leucine-rich repeat	108..131	CDD:275380	7/22 (32%)
		leucine-rich repeat	132..155	CDD:275380	9/22 (41%)
		leucine-rich repeat	156..179	CDD:275380	7/22 (32%)
		leucine-rich repeat	180..204	CDD:275380	9/23 (39%)
		leucine-rich repeat	205..228	CDD:275380	6/22 (27%)
		leucine-rich repeat	229..252	CDD:275380	7/22 (32%)
		leucine-rich repeat	253..276	CDD:275380	8/22 (36%)
		leucine-rich repeat	277..300	CDD:275380	8/22 (36%)
		leucine-rich repeat	301..322	CDD:275380	1/20 (5%)
		leucine-rich repeat	326..350	CDD:275380	6/23 (26%)
		leucine-rich repeat	351..373	CDD:275380	7/21 (33%)
		LRRCT	382..434	CDD:214507	16/51 (31%)
zgc:153913	NP_001073448.1	leucine-rich repeat	75..98	CDD:275380	2/22 (9%)
		LRR	<142..>352	CDD:443914	69/238 (29%)
		leucine-rich repeat	148..171	CDD:275380	9/22 (41%)
		leucine-rich repeat	172..195	CDD:275380	7/22 (32%)
		leucine-rich repeat	196..219	CDD:275380	9/23 (39%)
		leucine-rich repeat	220..241	CDD:275380	6/22 (27%)
		leucine-rich repeat	242..265	CDD:275380	7/22 (32%)
		leucine-rich repeat	266..289	CDD:275380	8/22 (36%)
		leucine-rich repeat	290..313	CDD:275380	8/22 (36%)
		leucine-rich repeat	314..337	CDD:275380	7/48 (15%)
		leucine-rich repeat	338..359	CDD:275380	7/20 (35%)
		PCC	342..>427	CDD:188093	26/81 (32%)