Protein Alignment trn and lrrn2

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_021335503.2
• Gene: lrrn2 / 558051
• ZFINID: ZDB-GENE-141212-289
• Length: 722
• Species: Danio rerio
• Alignment Length: 432
• Identity: 118/432 - (27%)
• Similarity: 186/432 - (43%)
• Gaps: 51/432 - (11%)

  Fly    15 ILASIGVEPAAGLANCPPGCQCD-----------DNTLVVQCGEGQLDVLPIALNPSIQRLVIKS 68
            :.:|:.::......:||..|.|.           .....|.|.:..|..||.:|....|.|.::|
Zfish    19 VTSSLVIQSMPWRVSCPHQCVCQIKPWYSPQSVYREAPTVDCNDLLLIQLPTSLPQETQTLRLQS 83

  Fly    69 NKIKTID-SSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAV 132
            |.|.::| |.:|....||.||||                        ||......|.....|.|:
Zfish    84 NLISSVDQSELQGLVNLTELDLS------------------------HNSFTSTRNLRITDLPAL 124

  Fly   133 TVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPV 197
            ..|::..||:..|.:..|..|..::||.|..||:..:.|.||.||.:|..|:|:.|.|..: |..
Zfish   125 LSLHMEENQLRHLPEAAFFGLSNLQELYLNHNRLRSISPGAFKGLDRLLRLHLNSNRLVVI-DRR 188

  Fly   198 IFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNR 262
            .|.|:..|..|.:|.|.::.||...|:.|..|..|.|.|..||.||..:..|||.|..:...||.
Zfish   189 WFHALQQLEVLMIGGNPVEIIQDLNFKPLGSLRSLVLAGMGLREISERALEGLQNLESISFYDNS 253

  Fly   263 LDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLE 327
            |.::|...|.||..|:.|.|.:|..:::..|.|..:..||.|.:|....|..:...|..:...|.
Zfish   254 LIKVPKEALQKLPGLKFLDLNKNPIQLVQRGDFRNMLHLKELGLNNMEELISIEHSAMENLPELT 318

  Fly   328 YLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSL-AEGLFPWKDLQTLDLSENPLSCDCRVM 391
            .|.:::|..|..:...|...|..::.::|.:|||::| ::.:.....||.:.|..||:.|||.:.
Zfish   319 KLEITNNPRLSYIHPQAFQKLLSMESLMLNSNALSALHSQTVRSLPSLQEISLHSNPIRCDCLIR 383

  Fly   392 WLHNLLVAKNASQD------DVSELLCEFPERLRGESLRHLN 427
            |:       .|..|      :.....|..|..|:...::.::
Zfish   384 WV-------GADNDKPVRFIEPQSTFCSEPPELKARRVKEVS 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	7/18 (39%)
		LRR	82..406	CDD:443914	96/330 (29%)
		leucine-rich repeat	84..107	CDD:275380	6/22 (27%)
		leucine-rich repeat	108..131	CDD:275380	4/22 (18%)
		leucine-rich repeat	132..155	CDD:275380	6/22 (27%)
		leucine-rich repeat	156..179	CDD:275380	10/22 (45%)
		leucine-rich repeat	180..204	CDD:275380	8/23 (35%)
		leucine-rich repeat	205..228	CDD:275380	8/22 (36%)
		leucine-rich repeat	229..252	CDD:275380	10/22 (45%)
		leucine-rich repeat	253..276	CDD:275380	8/22 (36%)
		leucine-rich repeat	277..300	CDD:275380	6/22 (27%)
		leucine-rich repeat	301..322	CDD:275380	6/20 (30%)
		leucine-rich repeat	326..350	CDD:275380	6/23 (26%)
		leucine-rich repeat	351..373	CDD:275380	5/22 (23%)
		LRRCT	382..434	CDD:214507	11/52 (21%)
lrrn2	XP_021335503.2	None