Protein Alignment trn and si:dkey-90m5.4

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: NP_001038237.1
• Gene: si:dkey-90m5.4 / 553466
• ZFINID: ZDB-GENE-041014-250
• Length: 327
• Species: Danio rerio
• Alignment Length: 429
• Identity: 105/429 - (24%)
• Similarity: 162/429 - (37%)
• Gaps: 117/429 - (27%)

  Fly    13 WCI--LASIGVEPAAGLANCPPGCQC--DDNTLVVQCGEGQLDVLP-IALNPSIQRLVIKSNKIK 72
            |.:  ||.:.|..:....:||..|.|  ...|..|.|.:..|...| ..|.||...|.|:
Zfish     4 WLVRALAVMLVLCSRDALSCPKRCTCHFSAKTTEVVCPDAGLSHFPGDGLPPSTTSLTIQ----- 63

  Fly    73 TIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNL 137
                    :..||.  |:|.||..:|        .|:|:||..||:..:.......|..:..::|
Zfish    64 --------FTNLTV--LTSEHLRAVP--------LLEELHLPGNKLSSLPADILKDLKYLHTIDL 110

  Fly   138 RGNQISELHQGTF--TPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQ 200
            ..|::.||.:..|  .|||   .|.|.:|||..:.|..|...|.|..|.|..|.|...|
Zfish   111 TDNELRELPEYVFRHAPLL---NLVLKDNRISNIHPDWFPNNSNLTWLDLSGNQLMKFP------ 166

  Fly   201 AMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDR 265
                                               .|.|:|:.|        |::|.||.|:::.
Zfish   167 -----------------------------------MAQLQNLRH--------LKVLHLSQNKIEE 188

  Fly   266 IPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLN 330
            :|...|.....||:|.|.||              :::.|:|.           |||.:.||.::.
Zfish   189 LPVGCLDAHTALERLYLDQN--------------KIQTLDVK-----------AFSGSTNLTHIF 228

  Fly   331 LSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQT--LDLSENPLSCDCRVMWL 393
            |..|: :..:.......|.:|::|.|..|.|..|:.|:.   |:.|  ::|:.||..||.::.:|
Zfish   229 LQKNR-IDSLPPTVFQELKRLEYVDLSDNRLQFLSPGIL---DINTSWVELTFNPWHCDAKIEYL 289

  Fly   394 HNLLVAKNASQDDVSELLCEFPERLRGESLRHLNPAMMG 432
            ...:..::..    ||..|..||.|:...:..|....||
Zfish   290 WRKITMESLQ----SEPKCAAPENLKDRVIATLTRKDMG 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	2/17 (12%)
		LRR	82..406	CDD:443914	78/327 (24%)
		leucine-rich repeat	84..107	CDD:275380	7/22 (32%)
		leucine-rich repeat	108..131	CDD:275380	7/22 (32%)
		leucine-rich repeat	132..155	CDD:275380	7/24 (29%)
		leucine-rich repeat	156..179	CDD:275380	7/22 (32%)
		leucine-rich repeat	180..204	CDD:275380	6/23 (26%)
		leucine-rich repeat	205..228	CDD:275380	0/22 (0%)
		leucine-rich repeat	229..252	CDD:275380	4/22 (18%)
		leucine-rich repeat	253..276	CDD:275380	7/22 (32%)
		leucine-rich repeat	277..300	CDD:275380	6/22 (27%)
		leucine-rich repeat	301..322	CDD:275380	4/20 (20%)
		leucine-rich repeat	326..350	CDD:275380	4/23 (17%)
		leucine-rich repeat	351..373	CDD:275380	7/21 (33%)
		LRRCT	382..434	CDD:214507	14/51 (27%)
si:dkey-90m5.4	NP_001038237.1	leucine-rich repeat	57..80	CDD:275380	9/45 (20%)
		LRR	<65..>262	CDD:443914	68/284 (24%)
		leucine-rich repeat	81..104	CDD:275380	7/22 (32%)
		leucine-rich repeat	105..126	CDD:275380	5/20 (25%)
		leucine-rich repeat	128..151	CDD:275380	9/25 (36%)
		leucine-rich repeat	152..175	CDD:275380	9/63 (14%)
		leucine-rich repeat	176..199	CDD:275380	7/22 (32%)
		leucine-rich repeat	200..223	CDD:275380	11/47 (23%)
		leucine-rich repeat	224..247	CDD:275380	4/23 (17%)
		leucine-rich repeat	248..271	CDD:275380	8/25 (32%)
		LRRCT	278..319	CDD:214507	11/44 (25%)